RNA–Protein interactions for RNA: ENST00000464673.1

LINC01998-201, Transcript of long intergenic non-protein coding RNA 1998, humanhuman

TSL 1 (best) BASIC

Gene LINC01998, Length 1,967 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01998-201ENST00000464673 NISCHQ9Y2I1 1504 aa22.43■■□□□ 1.18
LINC01998-201ENST00000464673 CCDC180Q9P1Z9 1646 aa19.72■□□□□ 0.75
LINC01998-201ENST00000464673 ABCC9O60706 1549 aa19.01■□□□□ 0.63
LINC01998-201ENST00000464673 ZCCHC6Q5VYS8 1495 aaKnown RBP18.76■□□□□ 0.59
LINC01998-201ENST00000464673 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
LINC01998-201ENST00000464673 DCAF1Q9Y4B6 1507 aa18.55■□□□□ 0.56
LINC01998-201ENST00000464673 NACADO15069 1562 aa18.48■□□□□ 0.55
LINC01998-201ENST00000464673 MYO15BQ96JP2 1530 aa18.48■□□□□ 0.55
LINC01998-201ENST00000464673 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
LINC01998-201ENST00000464673 SCRIBQ14160 1630 aa18.08■□□□□ 0.48
LINC01998-201ENST00000464673 SHROOM4Q9ULL8 1493 aa18.02■□□□□ 0.48
LINC01998-201ENST00000464673 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
LINC01998-201ENST00000464673 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
LINC01998-201ENST00000464673 BICRAQ9NZM4 1560 aa17.86■□□□□ 0.45
LINC01998-201ENST00000464673 CECR2Q9BXF3 1484 aa17.47■□□□□ 0.39
LINC01998-201ENST00000464673 EIF4G1Q04637 1599 aaKnown RBP17.36■□□□□ 0.37
LINC01998-201ENST00000464673 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
LINC01998-201ENST00000464673 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
LINC01998-201ENST00000464673 MROH2BQ7Z745 1585 aa17.31■□□□□ 0.36
LINC01998-201ENST00000464673 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
LINC01998-201ENST00000464673 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
LINC01998-201ENST00000464673 SUPT5HO00267 1087 aaKnown RBP17.17■□□□□ 0.34
LINC01998-201ENST00000464673 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
LINC01998-201ENST00000464673 WIZO95785 1651 aa17.15■□□□□ 0.34
LINC01998-201ENST00000464673 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
LINC01998-201ENST00000464673 PEG3Q9GZU2 1588 aa17.13■□□□□ 0.33
LINC01998-201ENST00000464673 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
LINC01998-201ENST00000464673 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
LINC01998-201ENST00000464673 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
LINC01998-201ENST00000464673 HMGXB3Q12766 1538 aa16.99■□□□□ 0.31
LINC01998-201ENST00000464673 TOP2AP11388 1531 aaKnown RBP16.95■□□□□ 0.3
LINC01998-201ENST00000464673 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
LINC01998-201ENST00000464673 CADPSQ9ULU8 1353 aa16.61■□□□□ 0.25
LINC01998-201ENST00000464673 CFTRP13569 1480 aa16.58■□□□□ 0.24
LINC01998-201ENST00000464673 NESP48681 1621 aa16.57■□□□□ 0.24
LINC01998-201ENST00000464673 LAMC3Q9Y6N6 1575 aa16.54■□□□□ 0.24
LINC01998-201ENST00000464673 PDS5BQ9NTI5 1447 aa16.44■□□□□ 0.22
LINC01998-201ENST00000464673 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
LINC01998-201ENST00000464673 PRDM2Q13029 1718 aa16.43■□□□□ 0.22
LINC01998-201ENST00000464673 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
LINC01998-201ENST00000464673 KIF21AQ7Z4S6 1674 aa16.35■□□□□ 0.21
LINC01998-201ENST00000464673 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
LINC01998-201ENST00000464673 CEP164Q9UPV0 1460 aa16.34■□□□□ 0.21
LINC01998-201ENST00000464673 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
LINC01998-201ENST00000464673 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
LINC01998-201ENST00000464673 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
LINC01998-201ENST00000464673 URB2Q14146 1524 aaKnown RBP16.22■□□□□ 0.19
LINC01998-201ENST00000464673 CUX1P39880 1505 aa16.21■□□□□ 0.19
LINC01998-201ENST00000464673 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
LINC01998-201ENST00000464673 THOC2Q8NI27 1593 aaKnown RBP16.19■□□□□ 0.18
LINC01998-201ENST00000464673 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
LINC01998-201ENST00000464673 TOPBP1Q92547 1522 aa16.18■□□□□ 0.18
LINC01998-201ENST00000464673 DNMBPQ6XZF7 1577 aa16.18■□□□□ 0.18
LINC01998-201ENST00000464673 WDR62O43379 1518 aa16.16■□□□□ 0.18
LINC01998-201ENST00000464673 TOP2BQ02880 1626 aa16.16■□□□□ 0.18
LINC01998-201ENST00000464673 BIVM-ERCC5R4GMW8 1640 aa16.13■□□□□ 0.17
LINC01998-201ENST00000464673 FGD5Q6ZNL6 1462 aa16.09■□□□□ 0.17
LINC01998-201ENST00000464673 POLA1P09884 1462 aaPredicted RBP16.08■□□□□ 0.17
LINC01998-201ENST00000464673 CUX2O14529 1486 aa16.04■□□□□ 0.16
LINC01998-201ENST00000464673 SOGA1O94964 1423 aa16.03■□□□□ 0.16
LINC01998-201ENST00000464673 RAD54L2Q9Y4B4 1467 aa16.02■□□□□ 0.16
LINC01998-201ENST00000464673 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
LINC01998-201ENST00000464673 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
LINC01998-201ENST00000464673 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
LINC01998-201ENST00000464673 TDRD9Q8NDG6 1382 aaKnown RBP15.92■□□□□ 0.14
LINC01998-201ENST00000464673 ZNF608Q9ULD9 1512 aaPredicted RBP15.91■□□□□ 0.14
LINC01998-201ENST00000464673 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
LINC01998-201ENST00000464673 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
LINC01998-201ENST00000464673 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
LINC01998-201ENST00000464673 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.13
LINC01998-201ENST00000464673 HRCP23327 699 aa15.87■□□□□ 0.13
LINC01998-201ENST00000464673 FAM9AQ8IZU1 332 aaPredicted RBP15.86■□□□□ 0.13
LINC01998-201ENST00000464673 GAPVD1Q14C86 1478 aa15.85■□□□□ 0.13
LINC01998-201ENST00000464673 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.13
LINC01998-201ENST00000464673 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.12
LINC01998-201ENST00000464673 EEA1Q15075 1411 aa15.81■□□□□ 0.12
LINC01998-201ENST00000464673 IGF1RP08069 1367 aa15.79■□□□□ 0.12
LINC01998-201ENST00000464673 CSRNP3Q8WYN3 585 aa15.78■□□□□ 0.12
LINC01998-201ENST00000464673 LOC105371045A0A1W2PR82 267 aa15.78■□□□□ 0.12
LINC01998-201ENST00000464673 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
LINC01998-201ENST00000464673 ERICH3Q5RHP9 1530 aa15.76■□□□□ 0.11
LINC01998-201ENST00000464673 PBRM1Q86U86 1689 aa15.75■□□□□ 0.11
LINC01998-201ENST00000464673 PCGF6Q9BYE7 350 aa15.72■□□□□ 0.11
LINC01998-201ENST00000464673 SNAPC4Q5SXM2 1469 aa15.7■□□□□ 0.1
LINC01998-201ENST00000464673 CARMIL1Q5VZK9 1371 aa15.7■□□□□ 0.1
LINC01998-201ENST00000464673 MAGI1Q96QZ7 1491 aaPredicted RBP15.69■□□□□ 0.1
LINC01998-201ENST00000464673 PRXQ9BXM0 1461 aa15.68■□□□□ 0.1
LINC01998-201ENST00000464673 CUL7Q14999 1698 aa15.67■□□□□ 0.1
LINC01998-201ENST00000464673 FHAD1B1AJZ9 1412 aa15.66■□□□□ 0.1
LINC01998-201ENST00000464673 ADAMTS12P58397 1594 aa15.65■□□□□ 0.1
LINC01998-201ENST00000464673 EHMT2Q96KQ7 1210 aa15.65■□□□□ 0.1
LINC01998-201ENST00000464673 FBLN2P98095 1184 aa15.64■□□□□ 0.09
LINC01998-201ENST00000464673 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
LINC01998-201ENST00000464673 SYNJ2O15056 1496 aa15.63■□□□□ 0.09
LINC01998-201ENST00000464673 RAPGEF2Q9Y4G8 1499 aa15.63■□□□□ 0.09
LINC01998-201ENST00000464673 TRIM26Q12899 539 aaPredicted RBP15.62■□□□□ 0.09
LINC01998-201ENST00000464673 KIF21BO75037 1637 aa15.61■□□□□ 0.09
LINC01998-201ENST00000464673 GRIN2AQ12879 1464 aa15.58■□□□□ 0.08
LINC01998-201ENST00000464673 GOLGA3Q08378 1498 aa15.57■□□□□ 0.08
LINC01998-201ENST00000464673 CHD1O14646 1710 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms