RNA–Protein interactions for RNA: ENST00000262825.9

CSF2RB-201, Transcript of colony stimulating factor 2 receptor beta common subunit, humanhuman

TSL 1 (best) BASIC

Gene CSF2RB, Length 4,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF2RB-201ENST00000262825 NISCHQ9Y2I1 1504 aa20.23■□□□□ 0.83
CSF2RB-201ENST00000262825 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
CSF2RB-201ENST00000262825 SHROOM4Q9ULL8 1493 aa18.18■□□□□ 0.5
CSF2RB-201ENST00000262825 SUPT5HO00267 1087 aaKnown RBP17.82■□□□□ 0.44
CSF2RB-201ENST00000262825 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
CSF2RB-201ENST00000262825 ABCC9O60706 1549 aa17.28■□□□□ 0.36
CSF2RB-201ENST00000262825 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
CSF2RB-201ENST00000262825 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
CSF2RB-201ENST00000262825 CCDC180Q9P1Z9 1646 aa16.94■□□□□ 0.3
CSF2RB-201ENST00000262825 PELP1Q8IZL8 1130 aaKnown RBP16.9■□□□□ 0.3
CSF2RB-201ENST00000262825 HRCP23327 699 aa16.87■□□□□ 0.29
CSF2RB-201ENST00000262825 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
CSF2RB-201ENST00000262825 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
CSF2RB-201ENST00000262825 TTBK1Q5TCY1 1321 aaPredicted RBP16.7■□□□□ 0.26
CSF2RB-201ENST00000262825 FAM9AQ8IZU1 332 aaPredicted RBP16.69■□□□□ 0.26
CSF2RB-201ENST00000262825 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
CSF2RB-201ENST00000262825 YTHDC1Q96MU7 727 aaKnown RBP16.57■□□□□ 0.24
CSF2RB-201ENST00000262825 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
CSF2RB-201ENST00000262825 TRIM41Q8WV44 630 aa16.42■□□□□ 0.22
CSF2RB-201ENST00000262825 CCER1Q8TC90 406 aaPredicted RBP16.38■□□□□ 0.21
CSF2RB-201ENST00000262825 LOC105371045A0A1W2PR82 267 aa16.37■□□□□ 0.21
CSF2RB-201ENST00000262825 MYT1Q01538 1121 aa16.37■□□□□ 0.21
CSF2RB-201ENST00000262825 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
CSF2RB-201ENST00000262825 ZEB1P37275 1124 aaPredicted RBP16.3■□□□□ 0.2
CSF2RB-201ENST00000262825 RANGAP1P46060 587 aaPredicted RBP16.24■□□□□ 0.19
CSF2RB-201ENST00000262825 TRIM26Q12899 539 aaPredicted RBP16.21■□□□□ 0.19
CSF2RB-201ENST00000262825 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
CSF2RB-201ENST00000262825 NACADO15069 1562 aa16.14■□□□□ 0.17
CSF2RB-201ENST00000262825 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
CSF2RB-201ENST00000262825 DCAF1Q9Y4B6 1507 aa16.12■□□□□ 0.17
CSF2RB-201ENST00000262825 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
CSF2RB-201ENST00000262825 ERICH6Q7L0X2 663 aa16.02■□□□□ 0.16
CSF2RB-201ENST00000262825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.01■□□□□ 0.15
CSF2RB-201ENST00000262825 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
CSF2RB-201ENST00000262825 SCAF1Q9H7N4 1312 aaKnown RBP16.01■□□□□ 0.15
CSF2RB-201ENST00000262825 UBTFP17480 764 aaKnown RBP15.99■□□□□ 0.15
CSF2RB-201ENST00000262825 DIEXFQ68CQ4 756 aaKnown RBP15.92■□□□□ 0.14
CSF2RB-201ENST00000262825 ACIN1Q9UKV3 1341 aaKnown RBP15.85■□□□□ 0.13
CSF2RB-201ENST00000262825 APLP2Q06481 763 aa15.82■□□□□ 0.12
CSF2RB-201ENST00000262825 MROH2BQ7Z745 1585 aa15.82■□□□□ 0.12
CSF2RB-201ENST00000262825 NEUROD1Q13562 356 aa15.8■□□□□ 0.12
CSF2RB-201ENST00000262825 MYO15BQ96JP2 1530 aa15.75■□□□□ 0.11
CSF2RB-201ENST00000262825 ATP1B4Q9UN42 357 aaPredicted RBP15.74■□□□□ 0.11
CSF2RB-201ENST00000262825 BCANQ96GW7 911 aa15.74■□□□□ 0.11
CSF2RB-201ENST00000262825 NEFLP07196 543 aa15.7■□□□□ 0.1
CSF2RB-201ENST00000262825 BAZ1AQ9NRL2 1556 aaPredicted RBP15.66■□□□□ 0.1
CSF2RB-201ENST00000262825 HNRNPUL2Q1KMD3 747 aaKnown RBP15.66■□□□□ 0.1
CSF2RB-201ENST00000262825 WIZO95785 1651 aa15.64■□□□□ 0.09
CSF2RB-201ENST00000262825 BAZ1BQ9UIG0 1483 aaKnown RBP15.58■□□□□ 0.08
CSF2RB-201ENST00000262825 CSRNP3Q8WYN3 585 aa15.49■□□□□ 0.07
CSF2RB-201ENST00000262825 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
CSF2RB-201ENST00000262825 ITGAEP38570 1179 aa15.47■□□□□ 0.07
CSF2RB-201ENST00000262825 SMARCA4P51532 1647 aa15.42■□□□□ 0.06
CSF2RB-201ENST00000262825 CNGB1Q14028 1251 aaPredicted RBP15.42■□□□□ 0.06
CSF2RB-201ENST00000262825 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
CSF2RB-201ENST00000262825 P3H3Q8IVL6 736 aa15.38■□□□□ 0.05
CSF2RB-201ENST00000262825 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
CSF2RB-201ENST00000262825 ZNF316A6NFI3 1004 aaPredicted RBP15.35■□□□□ 0.05
CSF2RB-201ENST00000262825 FBLN2P98095 1184 aa15.35■□□□□ 0.05
CSF2RB-201ENST00000262825 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
CSF2RB-201ENST00000262825 TOP2AP11388 1531 aaKnown RBP15.31■□□□□ 0.04
CSF2RB-201ENST00000262825 BICRAQ9NZM4 1560 aa15.31■□□□□ 0.04
CSF2RB-201ENST00000262825 SOGA1O94964 1423 aa15.29■□□□□ 0.04
CSF2RB-201ENST00000262825 ARID3CA6NKF2 412 aa15.28■□□□□ 0.04
CSF2RB-201ENST00000262825 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
CSF2RB-201ENST00000262825 UNC13AQ9UPW8 1703 aa15.24■□□□□ 0.03
CSF2RB-201ENST00000262825 MIER1Q8N108 512 aa15.24■□□□□ 0.03
CSF2RB-201ENST00000262825 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
CSF2RB-201ENST00000262825 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
CSF2RB-201ENST00000262825 BCL11AQ9H165 835 aa15.19■□□□□ 0.02
CSF2RB-201ENST00000262825 FKBP8Q14318 412 aa15.17■□□□□ 0.02
CSF2RB-201ENST00000262825 RTL5Q5HYW3 569 aaPredicted RBP15.17■□□□□ 0.02
CSF2RB-201ENST00000262825 POLR3GLQ9BT43 218 aa15.14■□□□□ 0.01
CSF2RB-201ENST00000262825 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
CSF2RB-201ENST00000262825 ANP32EQ9BTT0 268 aa15.08■□□□□ 0
CSF2RB-201ENST00000262825 EIF5BO60841 1220 aaKnown RBP15.07■□□□□ 0
CSF2RB-201ENST00000262825 FAM50AQ14320 339 aaKnown RBP15.07■□□□□ 0
CSF2RB-201ENST00000262825 CADPSQ9ULU8 1353 aa15.05■□□□□ 0
CSF2RB-201ENST00000262825 CEP162Q5TB80 1403 aa15.05■□□□□ -0
CSF2RB-201ENST00000262825 NBR1Q14596 966 aa15.05■□□□□ -0
CSF2RB-201ENST00000262825 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
CSF2RB-201ENST00000262825 CLIP1P30622 1438 aa15.02□□□□□ -0.01
CSF2RB-201ENST00000262825 CUX2O14529 1486 aa15.02□□□□□ -0.01
CSF2RB-201ENST00000262825 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
CSF2RB-201ENST00000262825 KIF27Q86VH2 1401 aa15□□□□□ -0.01
CSF2RB-201ENST00000262825 TRIM52Q96A61 297 aa15□□□□□ -0.01
CSF2RB-201ENST00000262825 DAXXQ9UER7 740 aaPredicted RBP14.99□□□□□ -0.01
CSF2RB-201ENST00000262825 GOLGA3Q08378 1498 aa14.99□□□□□ -0.01
CSF2RB-201ENST00000262825 IRX6P78412 446 aaPredicted RBP14.99□□□□□ -0.01
CSF2RB-201ENST00000262825 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
CSF2RB-201ENST00000262825 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
CSF2RB-201ENST00000262825 ERCC6Q03468 1493 aa14.98□□□□□ -0.01
CSF2RB-201ENST00000262825 NESP48681 1621 aa14.97□□□□□ -0.01
CSF2RB-201ENST00000262825 EEA1Q15075 1411 aa14.95□□□□□ -0.02
CSF2RB-201ENST00000262825 CEP164Q9UPV0 1460 aa14.92□□□□□ -0.02
CSF2RB-201ENST00000262825 TNIKQ9UKE5 1360 aa14.92□□□□□ -0.02
CSF2RB-201ENST00000262825 CHMP7Q8WUX9 453 aaPredicted RBP14.92□□□□□ -0.02
CSF2RB-201ENST00000262825 NPM2Q86SE8 214 aaKnown RBP14.91□□□□□ -0.02
CSF2RB-201ENST00000262825 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
CSF2RB-201ENST00000262825 DDX10Q13206 875 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms