RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
CCDC144CP-202ENST00000433419 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.57
CCDC144CP-202ENST00000433419 SUPT5HO00267 1087 aaKnown RBP18.02■□□□□ 0.48
CCDC144CP-202ENST00000433419 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
CCDC144CP-202ENST00000433419 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
CCDC144CP-202ENST00000433419 APLP2Q06481 763 aa17.3■□□□□ 0.36
CCDC144CP-202ENST00000433419 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
CCDC144CP-202ENST00000433419 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
CCDC144CP-202ENST00000433419 RANGAP1P46060 587 aaPredicted RBP16.75■□□□□ 0.27
CCDC144CP-202ENST00000433419 ATP1B4Q9UN42 357 aaPredicted RBP16.75■□□□□ 0.27
CCDC144CP-202ENST00000433419 UBTFP17480 764 aaKnown RBP16.66■□□□□ 0.26
CCDC144CP-202ENST00000433419 TTBK1Q5TCY1 1321 aaPredicted RBP16.64■□□□□ 0.25
CCDC144CP-202ENST00000433419 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
CCDC144CP-202ENST00000433419 PCGF6Q9BYE7 350 aa16.53■□□□□ 0.24
CCDC144CP-202ENST00000433419 ABCC9O60706 1549 aa16.39■□□□□ 0.21
CCDC144CP-202ENST00000433419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
CCDC144CP-202ENST00000433419 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
CCDC144CP-202ENST00000433419 MYT1LQ9UL68 1186 aa16.31■□□□□ 0.2
CCDC144CP-202ENST00000433419 CCER1Q8TC90 406 aaPredicted RBP16.27■□□□□ 0.2
CCDC144CP-202ENST00000433419 PABPN1Q86U42 306 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCDC144CP-202ENST00000433419 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
CCDC144CP-202ENST00000433419 CENPBP07199 599 aaPredicted RBP16.04■□□□□ 0.16
CCDC144CP-202ENST00000433419 ITGAEP38570 1179 aa15.98■□□□□ 0.15
CCDC144CP-202ENST00000433419 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.15
CCDC144CP-202ENST00000433419 TRIM26Q12899 539 aaPredicted RBP15.88■□□□□ 0.13
CCDC144CP-202ENST00000433419 FBLN2P98095 1184 aa15.87■□□□□ 0.13
CCDC144CP-202ENST00000433419 CHIC1Q5VXU3 224 aa15.86■□□□□ 0.13
CCDC144CP-202ENST00000433419 LOC105371045A0A1W2PR82 267 aa15.81■□□□□ 0.12
CCDC144CP-202ENST00000433419 NEFLP07196 543 aa15.81■□□□□ 0.12
CCDC144CP-202ENST00000433419 POLR3GLQ9BT43 218 aa15.78■□□□□ 0.12
CCDC144CP-202ENST00000433419 YTHDC1Q96MU7 727 aaKnown RBP15.76■□□□□ 0.11
CCDC144CP-202ENST00000433419 ERICH6Q7L0X2 663 aa15.71■□□□□ 0.11
CCDC144CP-202ENST00000433419 HRCP23327 699 aa15.68■□□□□ 0.1
CCDC144CP-202ENST00000433419 FAM50AQ14320 339 aaKnown RBP15.68■□□□□ 0.1
CCDC144CP-202ENST00000433419 SLC4A1APQ9BWU0 796 aaKnown RBP15.65■□□□□ 0.1
CCDC144CP-202ENST00000433419 TRIM52Q96A61 297 aa15.61■□□□□ 0.09
CCDC144CP-202ENST00000433419 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
CCDC144CP-202ENST00000433419 CDK11AQ9UQ88 783 aaPredicted RBP15.53■□□□□ 0.08
CCDC144CP-202ENST00000433419 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
CCDC144CP-202ENST00000433419 CNGB1Q14028 1251 aaPredicted RBP15.49■□□□□ 0.07
CCDC144CP-202ENST00000433419 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
CCDC144CP-202ENST00000433419 ESF1Q9H501 851 aaKnown RBP15.45■□□□□ 0.06
CCDC144CP-202ENST00000433419 P3H3Q8IVL6 736 aa15.43■□□□□ 0.06
CCDC144CP-202ENST00000433419 BCANQ96GW7 911 aa15.41■□□□□ 0.06
CCDC144CP-202ENST00000433419 ARID3CA6NKF2 412 aa15.4■□□□□ 0.06
CCDC144CP-202ENST00000433419 ZNF777Q9ULD5 760 aaPredicted RBP15.36■□□□□ 0.05
CCDC144CP-202ENST00000433419 ZNF326Q5BKZ1 582 aaKnown RBP15.35■□□□□ 0.05
CCDC144CP-202ENST00000433419 ZCCHC6Q5VYS8 1495 aaKnown RBP15.34■□□□□ 0.05
CCDC144CP-202ENST00000433419 NEUROD1Q13562 356 aa15.34■□□□□ 0.05
CCDC144CP-202ENST00000433419 DAXXQ9UER7 740 aaPredicted RBP15.34■□□□□ 0.05
CCDC144CP-202ENST00000433419 CCDC180Q9P1Z9 1646 aa15.33■□□□□ 0.04
CCDC144CP-202ENST00000433419 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
CCDC144CP-202ENST00000433419 CHMP7Q8WUX9 453 aaPredicted RBP15.27■□□□□ 0.03
CCDC144CP-202ENST00000433419 DIEXFQ68CQ4 756 aaKnown RBP15.26■□□□□ 0.03
CCDC144CP-202ENST00000433419 STAG3Q9UJ98 1225 aa15.23■□□□□ 0.03
CCDC144CP-202ENST00000433419 NEFMP07197 916 aa15.21■□□□□ 0.03
CCDC144CP-202ENST00000433419 CLSPNQ9HAW4 1339 aa15.16■□□□□ 0.02
CCDC144CP-202ENST00000433419 MYT1Q01538 1121 aa15.15■□□□□ 0.02
CCDC144CP-202ENST00000433419 CHGAP10645 457 aaKnown RBP15.14■□□□□ 0.01
CCDC144CP-202ENST00000433419 NACADO15069 1562 aa15.12■□□□□ 0.01
CCDC144CP-202ENST00000433419 PLPPR3Q6T4P5 718 aa15.12■□□□□ 0.01
CCDC144CP-202ENST00000433419 SLC24A1O60721 1099 aa15.11■□□□□ 0.01
CCDC144CP-202ENST00000433419 ANP32CO43423 234 aa15.1■□□□□ 0.01
CCDC144CP-202ENST00000433419 ZBTB47Q9UFB7 747 aaPredicted RBP15.1■□□□□ 0.01
CCDC144CP-202ENST00000433419 TSPY4P0CV99 314 aa15.1■□□□□ 0.01
CCDC144CP-202ENST00000433419 TSPY10P0CW01 314 aa15.1■□□□□ 0.01
CCDC144CP-202ENST00000433419 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
CCDC144CP-202ENST00000433419 MTUS2Q5JR59 1369 aa14.99□□□□□ -0.01
CCDC144CP-202ENST00000433419 ERCC6Q03468 1493 aa14.99□□□□□ -0.01
CCDC144CP-202ENST00000433419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.01
CCDC144CP-202ENST00000433419 PLEKHD1A6NEE1 506 aa14.98□□□□□ -0.01
CCDC144CP-202ENST00000433419 ZNF316A6NFI3 1004 aaPredicted RBP14.95□□□□□ -0.02
CCDC144CP-202ENST00000433419 CANXP27824 592 aaKnown RBP14.95□□□□□ -0.02
CCDC144CP-202ENST00000433419 KCNH8Q96L42 1107 aa14.94□□□□□ -0.02
CCDC144CP-202ENST00000433419 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
CCDC144CP-202ENST00000433419 CHIC2Q9UKJ5 165 aa14.93□□□□□ -0.02
CCDC144CP-202ENST00000433419 GTF3C3Q9Y5Q9 886 aa14.88□□□□□ -0.03
CCDC144CP-202ENST00000433419 EEA1Q15075 1411 aa14.86□□□□□ -0.03
CCDC144CP-202ENST00000433419 RSF1Q96T23 1441 aaPredicted RBP14.86□□□□□ -0.03
CCDC144CP-202ENST00000433419 ARID4BQ4LE39 1312 aaPredicted RBP14.85□□□□□ -0.03
CCDC144CP-202ENST00000433419 PPP1R15AO75807 674 aaPredicted RBP14.84□□□□□ -0.03
CCDC144CP-202ENST00000433419 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
CCDC144CP-202ENST00000433419 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.03
CCDC144CP-202ENST00000433419 ACIN1Q9UKV3 1341 aaKnown RBP14.83□□□□□ -0.03
CCDC144CP-202ENST00000433419 CLIP1P30622 1438 aa14.82□□□□□ -0.04
CCDC144CP-202ENST00000433419 DCAF1Q9Y4B6 1507 aa14.79□□□□□ -0.04
CCDC144CP-202ENST00000433419 RTL5Q5HYW3 569 aaPredicted RBP14.78□□□□□ -0.04
CCDC144CP-202ENST00000433419 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.04
CCDC144CP-202ENST00000433419 C14orf37Q86TY3 774 aa14.77□□□□□ -0.04
CCDC144CP-202ENST00000433419 BCL11AQ9H165 835 aa14.77□□□□□ -0.04
CCDC144CP-202ENST00000433419 CFDP1Q9UEE9 299 aaPredicted RBP14.77□□□□□ -0.05
CCDC144CP-202ENST00000433419 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
CCDC144CP-202ENST00000433419 KDM2AQ9Y2K7 1162 aa14.75□□□□□ -0.05
CCDC144CP-202ENST00000433419 TRHP20396 242 aaPredicted RBP14.74□□□□□ -0.05
CCDC144CP-202ENST00000433419 GOLGA3Q08378 1498 aa14.72□□□□□ -0.05
CCDC144CP-202ENST00000433419 NPM2Q86SE8 214 aaKnown RBP14.7□□□□□ -0.06
CCDC144CP-202ENST00000433419 RRP7BPQ9NSQ0 103 aa14.7□□□□□ -0.06
CCDC144CP-202ENST00000433419 PDS5BQ9NTI5 1447 aa14.68□□□□□ -0.06
CCDC144CP-202ENST00000433419 HAP1P54257 671 aaPredicted RBP14.64□□□□□ -0.07
CCDC144CP-202ENST00000433419 TMC1Q8TDI8 760 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms