RNA–Protein interactions for RNA: ENST00000381306.7

KDM4C-201, Transcript of lysine demethylase 4C, humanhuman

TSL 2 BASIC

Gene KDM4C, Length 4,601 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-201ENST00000381306 NISCHQ9Y2I1 1504 aa20.52■□□□□ 0.88
KDM4C-201ENST00000381306 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
KDM4C-201ENST00000381306 ABCC9O60706 1549 aa18.25■□□□□ 0.51
KDM4C-201ENST00000381306 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
KDM4C-201ENST00000381306 SUPT5HO00267 1087 aaKnown RBP17.93■□□□□ 0.46
KDM4C-201ENST00000381306 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
KDM4C-201ENST00000381306 EHMT2Q96KQ7 1210 aa17.46■□□□□ 0.39
KDM4C-201ENST00000381306 PABPN1Q86U42 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
KDM4C-201ENST00000381306 RB1CC1Q8TDY2 1594 aa17.15■□□□□ 0.34
KDM4C-201ENST00000381306 NACADO15069 1562 aa17.03■□□□□ 0.32
KDM4C-201ENST00000381306 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
KDM4C-201ENST00000381306 FAM9AQ8IZU1 332 aaPredicted RBP16.92■□□□□ 0.3
KDM4C-201ENST00000381306 PCGF6Q9BYE7 350 aa16.86■□□□□ 0.29
KDM4C-201ENST00000381306 SCRIBQ14160 1630 aa16.83■□□□□ 0.28
KDM4C-201ENST00000381306 TTBK1Q5TCY1 1321 aaPredicted RBP16.76■□□□□ 0.27
KDM4C-201ENST00000381306 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
KDM4C-201ENST00000381306 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
KDM4C-201ENST00000381306 MYO15BQ96JP2 1530 aa16.64■□□□□ 0.25
KDM4C-201ENST00000381306 PPARGC1BQ86YN6 1023 aaKnown RBP16.59■□□□□ 0.25
KDM4C-201ENST00000381306 LOC105371045A0A1W2PR82 267 aa16.56■□□□□ 0.24
KDM4C-201ENST00000381306 RANGAP1P46060 587 aaPredicted RBP16.39■□□□□ 0.21
KDM4C-201ENST00000381306 BICRAQ9NZM4 1560 aa16.35■□□□□ 0.21
KDM4C-201ENST00000381306 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
KDM4C-201ENST00000381306 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
KDM4C-201ENST00000381306 CECR2Q9BXF3 1484 aa16.27■□□□□ 0.19
KDM4C-201ENST00000381306 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
KDM4C-201ENST00000381306 EIF4G1Q04637 1599 aaKnown RBP16.15■□□□□ 0.18
KDM4C-201ENST00000381306 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
KDM4C-201ENST00000381306 HRCP23327 699 aa16.01■□□□□ 0.15
KDM4C-201ENST00000381306 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
KDM4C-201ENST00000381306 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
KDM4C-201ENST00000381306 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
KDM4C-201ENST00000381306 ATAD2BQ9ULI0 1458 aa15.9■□□□□ 0.14
KDM4C-201ENST00000381306 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
KDM4C-201ENST00000381306 UBTFP17480 764 aaKnown RBP15.88■□□□□ 0.13
KDM4C-201ENST00000381306 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
KDM4C-201ENST00000381306 SMARCA2P51531 1590 aa15.84■□□□□ 0.13
KDM4C-201ENST00000381306 SMARCA4P51532 1647 aa15.83■□□□□ 0.12
KDM4C-201ENST00000381306 RSF1Q96T23 1441 aaPredicted RBP15.82■□□□□ 0.12
KDM4C-201ENST00000381306 YTHDC1Q96MU7 727 aaKnown RBP15.8■□□□□ 0.12
KDM4C-201ENST00000381306 NCAPD3P42695 1498 aa15.8■□□□□ 0.12
KDM4C-201ENST00000381306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
KDM4C-201ENST00000381306 TRIM26Q12899 539 aaPredicted RBP15.78■□□□□ 0.12
KDM4C-201ENST00000381306 ATP1B4Q9UN42 357 aaPredicted RBP15.7■□□□□ 0.1
KDM4C-201ENST00000381306 APLP2Q06481 763 aa15.7■□□□□ 0.1
KDM4C-201ENST00000381306 WIZO95785 1651 aa15.68■□□□□ 0.1
KDM4C-201ENST00000381306 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
KDM4C-201ENST00000381306 NESP48681 1621 aa15.64■□□□□ 0.09
KDM4C-201ENST00000381306 ITGAEP38570 1179 aa15.61■□□□□ 0.09
KDM4C-201ENST00000381306 CADPSQ9ULU8 1353 aa15.59■□□□□ 0.09
KDM4C-201ENST00000381306 PDS5BQ9NTI5 1447 aa15.59■□□□□ 0.09
KDM4C-201ENST00000381306 HMGXB3Q12766 1538 aa15.56■□□□□ 0.08
KDM4C-201ENST00000381306 FBLN2P98095 1184 aa15.51■□□□□ 0.07
KDM4C-201ENST00000381306 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
KDM4C-201ENST00000381306 TOP2AP11388 1531 aaKnown RBP15.45■□□□□ 0.06
KDM4C-201ENST00000381306 ZEB1P37275 1124 aaPredicted RBP15.42■□□□□ 0.06
KDM4C-201ENST00000381306 FANCD2Q9BXW9 1451 aa15.39■□□□□ 0.05
KDM4C-201ENST00000381306 PEG3Q9GZU2 1588 aa15.39■□□□□ 0.05
KDM4C-201ENST00000381306 CEP164Q9UPV0 1460 aa15.38■□□□□ 0.05
KDM4C-201ENST00000381306 CNGB1Q14028 1251 aaPredicted RBP15.33■□□□□ 0.04
KDM4C-201ENST00000381306 LAMC3Q9Y6N6 1575 aa15.3■□□□□ 0.04
KDM4C-201ENST00000381306 CFTRP13569 1480 aa15.28■□□□□ 0.04
KDM4C-201ENST00000381306 CENPBP07199 599 aaPredicted RBP15.26■□□□□ 0.03
KDM4C-201ENST00000381306 DIEXFQ68CQ4 756 aaKnown RBP15.25■□□□□ 0.03
KDM4C-201ENST00000381306 MRC2Q9UBG0 1479 aa15.24■□□□□ 0.03
KDM4C-201ENST00000381306 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
KDM4C-201ENST00000381306 TDRD9Q8NDG6 1382 aaKnown RBP15.18■□□□□ 0.02
KDM4C-201ENST00000381306 CUX2O14529 1486 aa15.15■□□□□ 0.02
KDM4C-201ENST00000381306 SOGA1O94964 1423 aa15.13■□□□□ 0.01
KDM4C-201ENST00000381306 P3H3Q8IVL6 736 aa15.13■□□□□ 0.01
KDM4C-201ENST00000381306 GTF3C3Q9Y5Q9 886 aa15.13■□□□□ 0.01
KDM4C-201ENST00000381306 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
KDM4C-201ENST00000381306 KIF21AQ7Z4S6 1674 aa15.09■□□□□ 0.01
KDM4C-201ENST00000381306 WRNQ14191 1432 aaPredicted RBP eCLIP15.09■□□□□ 0.01
KDM4C-201ENST00000381306 ARID3CA6NKF2 412 aa15.07■□□□□ 0
KDM4C-201ENST00000381306 URB2Q14146 1524 aaKnown RBP15.06■□□□□ 0
KDM4C-201ENST00000381306 NEUROD1Q13562 356 aa15.05■□□□□ 0
KDM4C-201ENST00000381306 RAD54L2Q9Y4B4 1467 aa15.05■□□□□ -0
KDM4C-201ENST00000381306 AQRO60306 1485 aaKnown RBP eCLIP15.05■□□□□ -03e-7■■■■■ 36.6
KDM4C-201ENST00000381306 ABCC8Q09428 1581 aa15.04■□□□□ -0
KDM4C-201ENST00000381306 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
KDM4C-201ENST00000381306 TOPBP1Q92547 1522 aa15.04■□□□□ -0
KDM4C-201ENST00000381306 POLR3GLQ9BT43 218 aa15.01□□□□□ -0.01
KDM4C-201ENST00000381306 DNAJC5Q9H3Z4 198 aa15.01□□□□□ -0.01
KDM4C-201ENST00000381306 BCANQ96GW7 911 aa15□□□□□ -0.01
KDM4C-201ENST00000381306 FAM50AQ14320 339 aaKnown RBP14.99□□□□□ -0.01
KDM4C-201ENST00000381306 FGD5Q6ZNL6 1462 aa14.98□□□□□ -0.01
KDM4C-201ENST00000381306 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
KDM4C-201ENST00000381306 IFT140Q96RY7 1462 aa14.96□□□□□ -0.01
KDM4C-201ENST00000381306 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.02
KDM4C-201ENST00000381306 CYB5RLQ6IPT4 315 aa14.95□□□□□ -0.02
KDM4C-201ENST00000381306 POLA1P09884 1462 aaPredicted RBP14.94□□□□□ -0.02
KDM4C-201ENST00000381306 HIRIP3Q9BW71 556 aaPredicted RBP14.92□□□□□ -0.02
KDM4C-201ENST00000381306 WDR62O43379 1518 aa14.92□□□□□ -0.02
KDM4C-201ENST00000381306 THOC2Q8NI27 1593 aaKnown RBP14.91□□□□□ -0.02
KDM4C-201ENST00000381306 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
KDM4C-201ENST00000381306 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
KDM4C-201ENST00000381306 CUX1P39880 1505 aa14.87□□□□□ -0.03
KDM4C-201ENST00000381306 ZNF316A6NFI3 1004 aaPredicted RBP14.85□□□□□ -0.03
KDM4C-201ENST00000381306 ACIN1Q9UKV3 1341 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms