Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 U85056.1-201ENST00000616429 682 ntBASIC21.32■■□□□ 1
VIPAS39Q9H9C1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.32■■□□□ 1
VIPAS39Q9H9C1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.31■■□□□ 1
VIPAS39Q9H9C1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 KRT18P60-201ENST00000312876 1297 ntBASIC21.3■■□□□ 1
VIPAS39Q9H9C1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 PVT1_1.1-201ENST00000615125 194 ntBASIC21.3■■□□□ 1
VIPAS39Q9H9C1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 AL158211.5-201ENST00000623583 2518 ntBASIC21.3■■□□□ 1
VIPAS39Q9H9C1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.3■■□□□ 1
VIPAS39Q9H9C1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 AC074183.2-201ENST00000623112 922 ntBASIC21.29■■□□□ 1
VIPAS39Q9H9C1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.29■■□□□ 1
VIPAS39Q9H9C1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.28■■□□□ 1
VIPAS39Q9H9C1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.27■■□□□ 1
VIPAS39Q9H9C1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
VIPAS39Q9H9C1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VIPAS39Q9H9C1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.27■■□□□ 1
VIPAS39Q9H9C1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.27■■□□□ 1
VIPAS39Q9H9C1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.27■■□□□ 1
VIPAS39Q9H9C1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.27■■□□□ 1
VIPAS39Q9H9C1 Z92544.1-202ENST00000571933 1220 ntBASIC21.27■■□□□ 1
VIPAS39Q9H9C1 MIR4449-201ENST00000578365 66 ntBASIC21.27■■□□□ 1
VIPAS39Q9H9C1 AC137630.3-201ENST00000607245 391 ntBASIC21.27■■□□□ 1
VIPAS39Q9H9C1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
VIPAS39Q9H9C1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VIPAS39Q9H9C1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms