Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGI1O95970 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGI1O95970 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.18■□□□□ 0.66
LGI1O95970 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.18■□□□□ 0.66
LGI1O95970 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.18■□□□□ 0.66
LGI1O95970 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.18■□□□□ 0.66
LGI1O95970 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.18■□□□□ 0.66
LGI1O95970 AC073314.1-201ENST00000568729 2216 ntBASIC19.18■□□□□ 0.66
LGI1O95970 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LGI1O95970 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LGI1O95970 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGI1O95970 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LGI1O95970 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGI1O95970 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGI1O95970 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGI1O95970 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.18■□□□□ 0.66
LGI1O95970 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LGI1O95970 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LGI1O95970 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGI1O95970 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGI1O95970 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LGI1O95970 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGI1O95970 ZNRF2P3-201ENST00000424200 374 ntBASIC19.17■□□□□ 0.66
LGI1O95970 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGI1O95970 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGI1O95970 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LGI1O95970 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGI1O95970 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LGI1O95970 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
LGI1O95970 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGI1O95970 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.17■□□□□ 0.66
LGI1O95970 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.17■□□□□ 0.66
LGI1O95970 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LGI1O95970 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LGI1O95970 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 AC061975.6-201ENST00000579045 1553 ntBASIC19.16■□□□□ 0.66
LGI1O95970 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
LGI1O95970 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.16■□□□□ 0.66
LGI1O95970 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.16■□□□□ 0.66
LGI1O95970 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LGI1O95970 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LGI1O95970 AC007225.1-201ENST00000566331 1836 ntBASIC19.16■□□□□ 0.66
LGI1O95970 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LGI1O95970 AP004607.4-201ENST00000530158 1459 ntBASIC19.16■□□□□ 0.66
LGI1O95970 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.15■□□□□ 0.66
LGI1O95970 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
LGI1O95970 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.15■□□□□ 0.66
LGI1O95970 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.15■□□□□ 0.66
LGI1O95970 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.15■□□□□ 0.66
LGI1O95970 AL358852.1-201ENST00000623174 1268 ntBASIC19.15■□□□□ 0.66
LGI1O95970 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.15■□□□□ 0.66
LGI1O95970 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LGI1O95970 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
LGI1O95970 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
LGI1O95970 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.14■□□□□ 0.66
LGI1O95970 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LGI1O95970 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LGI1O95970 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LGI1O95970 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LGI1O95970 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.14■□□□□ 0.65
LGI1O95970 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LGI1O95970 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.14■□□□□ 0.65
LGI1O95970 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.14■□□□□ 0.65
LGI1O95970 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.14■□□□□ 0.65
LGI1O95970 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.14■□□□□ 0.65
LGI1O95970 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LGI1O95970 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LGI1O95970 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LGI1O95970 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LGI1O95970 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms