Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP3D1O14617 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3D1O14617 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.37■□□□□ 0.69
AP3D1O14617 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.37■□□□□ 0.69
AP3D1O14617 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.37■□□□□ 0.69
AP3D1O14617 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
AP3D1O14617 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.37■□□□□ 0.69
AP3D1O14617 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3D1O14617 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
AP3D1O14617 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3D1O14617 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
AP3D1O14617 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
AP3D1O14617 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.37■□□□□ 0.69
AP3D1O14617 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3D1O14617 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3D1O14617 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.37■□□□□ 0.69
AP3D1O14617 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3D1O14617 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3D1O14617 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3D1O14617 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3D1O14617 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3D1O14617 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3D1O14617 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
AP3D1O14617 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
AP3D1O14617 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.36■□□□□ 0.69
AP3D1O14617 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP3D1O14617 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.36■□□□□ 0.69
AP3D1O14617 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.36■□□□□ 0.69
AP3D1O14617 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.36■□□□□ 0.69
AP3D1O14617 AL354811.1-201ENST00000610286 706 ntBASIC19.36■□□□□ 0.69
AP3D1O14617 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.36■□□□□ 0.69
AP3D1O14617 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.36■□□□□ 0.69
AP3D1O14617 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3D1O14617 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP3D1O14617 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP3D1O14617 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3D1O14617 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP3D1O14617 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3D1O14617 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
AP3D1O14617 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3D1O14617 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.35■□□□□ 0.69
AP3D1O14617 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP3D1O14617 IRS3P-201ENST00000223076 1006 ntBASIC19.35■□□□□ 0.69
AP3D1O14617 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.35■□□□□ 0.69
AP3D1O14617 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3D1O14617 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3D1O14617 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
AP3D1O14617 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP3D1O14617 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3D1O14617 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3D1O14617 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
AP3D1O14617 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3D1O14617 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
AP3D1O14617 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.34■□□□□ 0.69
AP3D1O14617 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3D1O14617 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3D1O14617 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.34■□□□□ 0.69
AP3D1O14617 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.34■□□□□ 0.69
AP3D1O14617 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
AP3D1O14617 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP3D1O14617 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3D1O14617 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3D1O14617 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.34■□□□□ 0.69
AP3D1O14617 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP3D1O14617 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.34■□□□□ 0.69
AP3D1O14617 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP3D1O14617 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.34■□□□□ 0.69
AP3D1O14617 AL358852.1-201ENST00000623174 1268 ntBASIC19.34■□□□□ 0.69
AP3D1O14617 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP3D1O14617 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.34■□□□□ 0.69
AP3D1O14617 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.34■□□□□ 0.69
AP3D1O14617 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
AP3D1O14617 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3D1O14617 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP3D1O14617 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.33■□□□□ 0.69
AP3D1O14617 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
AP3D1O14617 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP3D1O14617 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
AP3D1O14617 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP3D1O14617 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.33■□□□□ 0.69
AP3D1O14617 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP3D1O14617 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP3D1O14617 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.33■□□□□ 0.68
AP3D1O14617 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.33■□□□□ 0.68
AP3D1O14617 TPRG1LP1-201ENST00000598702 760 ntBASIC19.33■□□□□ 0.68
AP3D1O14617 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.33■□□□□ 0.68
AP3D1O14617 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
AP3D1O14617 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3D1O14617 AC007952.6-201ENST00000573168 2673 ntBASIC19.33■□□□□ 0.68
AP3D1O14617 AC003957.1-201ENST00000625108 2673 ntBASIC19.33■□□□□ 0.68
AP3D1O14617 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.33■□□□□ 0.68
AP3D1O14617 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP3D1O14617 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP3D1O14617 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP3D1O14617 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3D1O14617 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.32■□□□□ 0.68
AP3D1O14617 AL157384.1-201ENST00000445995 2473 ntBASIC19.32■□□□□ 0.68
AP3D1O14617 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3D1O14617 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3D1O14617 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms