Protein–RNA interactions for Protein: Q9Y5X3

SNX5, Sorting nexin-5, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5Q9Y5X3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 MTDHP2-201ENST00000601468 714 ntBASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX5Q9Y5X3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 AL020996.1-203ENST00000536896 2307 ntBASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX5Q9Y5X3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 AC009102.2-201ENST00000606772 1639 ntBASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SNX5Q9Y5X3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 AC090340.1-201ENST00000620778 4980 ntBASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX5Q9Y5X3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
SNX5Q9Y5X3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 MIR4787-201ENST00000607364 84 ntBASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX5Q9Y5X3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms