Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.61■□□□□ 0.89
MKS1Q9NXB0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.61■□□□□ 0.89
MKS1Q9NXB0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.61■□□□□ 0.89
MKS1Q9NXB0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.61■□□□□ 0.89
MKS1Q9NXB0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.61■□□□□ 0.89
MKS1Q9NXB0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
MKS1Q9NXB0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.61■□□□□ 0.89
MKS1Q9NXB0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MKS1Q9NXB0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
MKS1Q9NXB0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.61■□□□□ 0.89
MKS1Q9NXB0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.61■□□□□ 0.89
MKS1Q9NXB0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.6■□□□□ 0.89
MKS1Q9NXB0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 AC011484.1-201ENST00000377652 1995 ntBASIC20.59■□□□□ 0.89
MKS1Q9NXB0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.59■□□□□ 0.89
MKS1Q9NXB0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MKS1Q9NXB0 FP700111.2-201ENST00000619190 1892 ntBASIC20.58■□□□□ 0.89
MKS1Q9NXB0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MKS1Q9NXB0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MKS1Q9NXB0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
MKS1Q9NXB0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
MKS1Q9NXB0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MKS1Q9NXB0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MKS1Q9NXB0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MKS1Q9NXB0 AL391422.3-201ENST00000603791 2761 ntBASIC20.58■□□□□ 0.88
MKS1Q9NXB0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.58■□□□□ 0.88
MKS1Q9NXB0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MKS1Q9NXB0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
MKS1Q9NXB0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MKS1Q9NXB0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MKS1Q9NXB0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MKS1Q9NXB0 AC005224.4-201ENST00000583262 1652 ntBASIC20.58■□□□□ 0.88
MKS1Q9NXB0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 IGHV3-19-201ENST00000521488 291 ntBASIC20.57■□□□□ 0.88
MKS1Q9NXB0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MKS1Q9NXB0 AC099778.1-201ENST00000568593 1911 ntBASIC20.57■□□□□ 0.88
MKS1Q9NXB0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MKS1Q9NXB0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MKS1Q9NXB0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MKS1Q9NXB0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MKS1Q9NXB0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MKS1Q9NXB0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms