Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSTQ99698 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSTQ99698 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSTQ99698 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSTQ99698 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSTQ99698 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSTQ99698 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
LYSTQ99698 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSTQ99698 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSTQ99698 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSTQ99698 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSTQ99698 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSTQ99698 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LYSTQ99698 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.55□□□□□ -0.08
LYSTQ99698 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSTQ99698 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
LYSTQ99698 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSTQ99698 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
LYSTQ99698 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSTQ99698 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSTQ99698 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LYSTQ99698 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
LYSTQ99698 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.55□□□□□ -0.08
LYSTQ99698 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.55□□□□□ -0.08
LYSTQ99698 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LYSTQ99698 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSTQ99698 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSTQ99698 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSTQ99698 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.54□□□□□ -0.08
LYSTQ99698 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.54□□□□□ -0.08
LYSTQ99698 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSTQ99698 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSTQ99698 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSTQ99698 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSTQ99698 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LYSTQ99698 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LYSTQ99698 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.54□□□□□ -0.08
LYSTQ99698 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSTQ99698 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSTQ99698 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSTQ99698 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LYSTQ99698 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSTQ99698 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSTQ99698 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSTQ99698 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.54□□□□□ -0.08
LYSTQ99698 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSTQ99698 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSTQ99698 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
LYSTQ99698 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSTQ99698 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.54□□□□□ -0.08
LYSTQ99698 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSTQ99698 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSTQ99698 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LYSTQ99698 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSTQ99698 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSTQ99698 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.53□□□□□ -0.08
LYSTQ99698 AL121894.2-201ENST00000602977 491 ntBASIC14.53□□□□□ -0.08
LYSTQ99698 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.53□□□□□ -0.08
LYSTQ99698 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSTQ99698 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LYSTQ99698 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.53□□□□□ -0.08
LYSTQ99698 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSTQ99698 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSTQ99698 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSTQ99698 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LYSTQ99698 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSTQ99698 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LYSTQ99698 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSTQ99698 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.53□□□□□ -0.08
LYSTQ99698 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.53□□□□□ -0.08
LYSTQ99698 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSTQ99698 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LYSTQ99698 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSTQ99698 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LYSTQ99698 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LYSTQ99698 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYSTQ99698 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LYSTQ99698 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSTQ99698 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSTQ99698 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.52□□□□□ -0.08
LYSTQ99698 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LYSTQ99698 AC003102.1-202ENST00000563394 1796 ntBASIC14.52□□□□□ -0.08
LYSTQ99698 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSTQ99698 CASK-201ENST00000378154 2494 ntTSL 5 BASIC14.52□□□□□ -0.08
LYSTQ99698 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LYSTQ99698 KRT17P3-201ENST00000420566 1262 ntBASIC14.52□□□□□ -0.09
LYSTQ99698 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSTQ99698 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSTQ99698 C1orf229-201ENST00000623686 2258 ntBASIC14.52□□□□□ -0.09
LYSTQ99698 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.52□□□□□ -0.09
LYSTQ99698 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
LYSTQ99698 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.52□□□□□ -0.09
LYSTQ99698 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSTQ99698 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSTQ99698 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.52□□□□□ -0.09
LYSTQ99698 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LYSTQ99698 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LYSTQ99698 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.52□□□□□ -0.09
LYSTQ99698 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.52□□□□□ -0.09
LYSTQ99698 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms