Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHCHD1Q96BP2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHCHD1Q96BP2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHCHD1Q96BP2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.2■□□□□ 0.02
CHCHD1Q96BP2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHCHD1Q96BP2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHCHD1Q96BP2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 AC007225.1-201ENST00000566331 1836 ntBASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 AL512408.1-201ENST00000569378 2000 ntBASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHCHD1Q96BP2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHCHD1Q96BP2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CHCHD1Q96BP2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms