Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SWSAP1Q6NVH7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SWSAP1Q6NVH7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SWSAP1Q6NVH7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SWSAP1Q6NVH7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SWSAP1Q6NVH7 MIPEPP3-201ENST00000412105 444 ntBASIC23.28■■□□□ 1.32
SWSAP1Q6NVH7 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.28■■□□□ 1.32
SWSAP1Q6NVH7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.28■■□□□ 1.32
SWSAP1Q6NVH7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.28■■□□□ 1.32
SWSAP1Q6NVH7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.28■■□□□ 1.32
SWSAP1Q6NVH7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SWSAP1Q6NVH7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SWSAP1Q6NVH7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SWSAP1Q6NVH7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SWSAP1Q6NVH7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SWSAP1Q6NVH7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SWSAP1Q6NVH7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.26■■□□□ 1.31
SWSAP1Q6NVH7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SWSAP1Q6NVH7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
SWSAP1Q6NVH7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 AC098934.4-201ENST00000564127 592 ntBASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 AC010980.2-201ENST00000587099 1412 ntBASIC23.25■■□□□ 1.31
SWSAP1Q6NVH7 AC244015.2-201ENST00000616358 1861 ntBASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 AC069152.1-201ENST00000438030 544 ntBASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 CDV3P1-201ENST00000471403 739 ntBASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SWSAP1Q6NVH7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 BX276092.2-201ENST00000417668 665 ntBASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 AC133041.1-202ENST00000642053 222 ntBASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
SWSAP1Q6NVH7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.22■■□□□ 1.31
SWSAP1Q6NVH7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SWSAP1Q6NVH7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms