Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.84■□□□□ 0.61
HMGN1P05114 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGN1P05114 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.84■□□□□ 0.61
HMGN1P05114 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
HMGN1P05114 AC073314.1-201ENST00000568729 2216 ntBASIC18.84■□□□□ 0.61
HMGN1P05114 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.84■□□□□ 0.61
HMGN1P05114 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGN1P05114 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HMGN1P05114 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGN1P05114 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGN1P05114 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HMGN1P05114 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.84■□□□□ 0.61
HMGN1P05114 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.84■□□□□ 0.61
HMGN1P05114 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.84■□□□□ 0.61
HMGN1P05114 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGN1P05114 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGN1P05114 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGN1P05114 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HMGN1P05114 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGN1P05114 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGN1P05114 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HMGN1P05114 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.84■□□□□ 0.61
HMGN1P05114 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HMGN1P05114 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
HMGN1P05114 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
HMGN1P05114 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGN1P05114 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.83■□□□□ 0.61
HMGN1P05114 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGN1P05114 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HMGN1P05114 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGN1P05114 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HMGN1P05114 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HMGN1P05114 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGN1P05114 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.83■□□□□ 0.6
HMGN1P05114 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGN1P05114 BX842568.3-201ENST00000418104 571 ntBASIC18.83■□□□□ 0.6
HMGN1P05114 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.83■□□□□ 0.6
HMGN1P05114 AC133561.4-201ENST00000566112 224 ntBASIC18.83■□□□□ 0.6
HMGN1P05114 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.83■□□□□ 0.6
HMGN1P05114 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.83■□□□□ 0.6
HMGN1P05114 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGN1P05114 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HMGN1P05114 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.83■□□□□ 0.6
HMGN1P05114 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HMGN1P05114 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.83■□□□□ 0.6
HMGN1P05114 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
HMGN1P05114 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGN1P05114 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGN1P05114 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HMGN1P05114 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGN1P05114 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGN1P05114 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGN1P05114 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.82■□□□□ 0.6
HMGN1P05114 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HMGN1P05114 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGN1P05114 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HMGN1P05114 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HMGN1P05114 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGN1P05114 AL356441.2-201ENST00000443009 864 ntBASIC18.82■□□□□ 0.6
HMGN1P05114 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGN1P05114 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.82■□□□□ 0.6
HMGN1P05114 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.82■□□□□ 0.6
HMGN1P05114 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGN1P05114 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGN1P05114 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGN1P05114 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGN1P05114 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGN1P05114 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGN1P05114 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
HMGN1P05114 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HMGN1P05114 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGN1P05114 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGN1P05114 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGN1P05114 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGN1P05114 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HMGN1P05114 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGN1P05114 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HMGN1P05114 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.81■□□□□ 0.6
HMGN1P05114 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGN1P05114 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGN1P05114 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HMGN1P05114 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGN1P05114 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
HMGN1P05114 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGN1P05114 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HMGN1P05114 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGN1P05114 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGN1P05114 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGN1P05114 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGN1P05114 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGN1P05114 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGN1P05114 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HMGN1P05114 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGN1P05114 AC007225.1-201ENST00000566331 1836 ntBASIC18.8■□□□□ 0.6
HMGN1P05114 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGN1P05114 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGN1P05114 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.8■□□□□ 0.6
HMGN1P05114 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGN1P05114 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGN1P05114 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms