Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SIRPB1O00241 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIRPB1O00241 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIRPB1O00241 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SIRPB1O00241 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIRPB1O00241 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.59■□□□□ 0.41
SIRPB1O00241 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.59■□□□□ 0.41
SIRPB1O00241 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.59■□□□□ 0.41
SIRPB1O00241 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.59■□□□□ 0.41
SIRPB1O00241 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.59■□□□□ 0.41
SIRPB1O00241 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SIRPB1O00241 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIRPB1O00241 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.59■□□□□ 0.41
SIRPB1O00241 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIRPB1O00241 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIRPB1O00241 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIRPB1O00241 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIRPB1O00241 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SIRPB1O00241 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SIRPB1O00241 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.58■□□□□ 0.41
SIRPB1O00241 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SIRPB1O00241 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIRPB1O00241 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIRPB1O00241 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.58■□□□□ 0.41
SIRPB1O00241 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIRPB1O00241 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIRPB1O00241 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
SIRPB1O00241 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.58■□□□□ 0.41
SIRPB1O00241 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SIRPB1O00241 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.58■□□□□ 0.4
SIRPB1O00241 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIRPB1O00241 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIRPB1O00241 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.58■□□□□ 0.4
SIRPB1O00241 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIRPB1O00241 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIRPB1O00241 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SIRPB1O00241 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIRPB1O00241 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SIRPB1O00241 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIRPB1O00241 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIRPB1O00241 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIRPB1O00241 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.57■□□□□ 0.4
SIRPB1O00241 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIRPB1O00241 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.57■□□□□ 0.4
SIRPB1O00241 EEF1DP3-203ENST00000566025 782 ntBASIC17.57■□□□□ 0.4
SIRPB1O00241 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SIRPB1O00241 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.57■□□□□ 0.4
SIRPB1O00241 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.57■□□□□ 0.4
SIRPB1O00241 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIRPB1O00241 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.57■□□□□ 0.4
SIRPB1O00241 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIRPB1O00241 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SIRPB1O00241 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.57■□□□□ 0.4
SIRPB1O00241 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SIRPB1O00241 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SIRPB1O00241 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIRPB1O00241 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.56■□□□□ 0.4
SIRPB1O00241 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIRPB1O00241 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIRPB1O00241 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.56■□□□□ 0.4
SIRPB1O00241 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIRPB1O00241 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIRPB1O00241 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIRPB1O00241 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIRPB1O00241 AC027612.3-201ENST00000413684 1047 ntBASIC17.56■□□□□ 0.4
SIRPB1O00241 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIRPB1O00241 AC053503.5-201ENST00000601508 636 ntBASIC17.56■□□□□ 0.4
SIRPB1O00241 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIRPB1O00241 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.56■□□□□ 0.4
SIRPB1O00241 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SIRPB1O00241 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SIRPB1O00241 KRT87P-202ENST00000534226 1464 ntBASIC17.56■□□□□ 0.4
SIRPB1O00241 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.55■□□□□ 0.4
SIRPB1O00241 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.55■□□□□ 0.4
SIRPB1O00241 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.55■□□□□ 0.4
SIRPB1O00241 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.55■□□□□ 0.4
SIRPB1O00241 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.55■□□□□ 0.4
SIRPB1O00241 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SIRPB1O00241 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SIRPB1O00241 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SIRPB1O00241 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SIRPB1O00241 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIRPB1O00241 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIRPB1O00241 AC061975.6-201ENST00000579045 1553 ntBASIC17.54■□□□□ 0.4
SIRPB1O00241 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SIRPB1O00241 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIRPB1O00241 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.54■□□□□ 0.4
SIRPB1O00241 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms