Protein–RNA interactions for Protein: J3QQQ9

Uncharacterized protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
J3QQQ9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
J3QQQ9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
J3QQQ9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
J3QQQ9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
J3QQQ9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.35□□□□□ -0.11
J3QQQ9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
J3QQQ9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
J3QQQ9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
J3QQQ9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
J3QQQ9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
J3QQQ9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.35□□□□□ -0.11
J3QQQ9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.35□□□□□ -0.11
J3QQQ9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
J3QQQ9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
J3QQQ9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
J3QQQ9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
J3QQQ9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
J3QQQ9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.34□□□□□ -0.11
J3QQQ9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
J3QQQ9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
J3QQQ9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC14.34□□□□□ -0.11
J3QQQ9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.34□□□□□ -0.11
J3QQQ9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
J3QQQ9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.34□□□□□ -0.11
J3QQQ9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
J3QQQ9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
J3QQQ9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
J3QQQ9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
J3QQQ9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.34□□□□□ -0.11
J3QQQ9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
J3QQQ9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
J3QQQ9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
J3QQQ9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
J3QQQ9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.33□□□□□ -0.12
J3QQQ9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.33□□□□□ -0.12
J3QQQ9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
J3QQQ9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.33□□□□□ -0.12
J3QQQ9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
J3QQQ9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
J3QQQ9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
J3QQQ9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC14.33□□□□□ -0.12
J3QQQ9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
J3QQQ9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC14.33□□□□□ -0.12
J3QQQ9 SNX5-217ENST00000606557 1087 ntBASIC14.33□□□□□ -0.12
J3QQQ9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
J3QQQ9 AC098818.2-201ENST00000564925 2320 ntBASIC14.33□□□□□ -0.12
J3QQQ9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
J3QQQ9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
J3QQQ9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
J3QQQ9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.33□□□□□ -0.12
J3QQQ9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
J3QQQ9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
J3QQQ9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
J3QQQ9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
J3QQQ9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.32□□□□□ -0.12
J3QQQ9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
J3QQQ9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
J3QQQ9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.32□□□□□ -0.12
J3QQQ9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
J3QQQ9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.32□□□□□ -0.12
J3QQQ9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
J3QQQ9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
J3QQQ9 KRT18P24-201ENST00000344739 1156 ntBASIC14.32□□□□□ -0.12
J3QQQ9 MIR639-201ENST00000384974 98 ntBASIC14.32□□□□□ -0.12
J3QQQ9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC14.32□□□□□ -0.12
J3QQQ9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
J3QQQ9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14.32□□□□□ -0.12
J3QQQ9 AC005703.6-201ENST00000623265 1329 ntBASIC14.32□□□□□ -0.12
J3QQQ9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
J3QQQ9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
J3QQQ9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
J3QQQ9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
J3QQQ9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
J3QQQ9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.32□□□□□ -0.12
J3QQQ9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
J3QQQ9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
J3QQQ9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
J3QQQ9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.32□□□□□ -0.12
J3QQQ9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.32□□□□□ -0.12
J3QQQ9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
J3QQQ9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.32□□□□□ -0.12
J3QQQ9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
J3QQQ9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
J3QQQ9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
J3QQQ9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms