Protein–RNA interactions for Protein: A6NM43

CCT8L1P, Putative T-complex protein 1 subunit theta-like 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT8L1PA6NM43 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCT8L1PA6NM43 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCT8L1PA6NM43 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCT8L1PA6NM43 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 AL512408.1-201ENST00000569378 2000 ntBASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 AC099778.1-201ENST00000568593 1911 ntBASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 OR7E47P-201ENST00000546390 1422 ntBASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCT8L1PA6NM43 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCT8L1PA6NM43 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCT8L1PA6NM43 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.64■□□□□ 0.9
CCT8L1PA6NM43 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.64■□□□□ 0.9
CCT8L1PA6NM43 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CCT8L1PA6NM43 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCT8L1PA6NM43 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCT8L1PA6NM43 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.64■□□□□ 0.89
CCT8L1PA6NM43 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCT8L1PA6NM43 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCT8L1PA6NM43 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCT8L1PA6NM43 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCT8L1PA6NM43 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCT8L1PA6NM43 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.64■□□□□ 0.89
CCT8L1PA6NM43 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.63■□□□□ 0.89
CCT8L1PA6NM43 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCT8L1PA6NM43 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCT8L1PA6NM43 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.63■□□□□ 0.89
CCT8L1PA6NM43 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCT8L1PA6NM43 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCT8L1PA6NM43 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.63■□□□□ 0.89
CCT8L1PA6NM43 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCT8L1PA6NM43 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.63■□□□□ 0.89
CCT8L1PA6NM43 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
CCT8L1PA6NM43 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCT8L1PA6NM43 AC007225.1-201ENST00000566331 1836 ntBASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 AP000974.1-201ENST00000623909 2387 ntBASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCT8L1PA6NM43 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 TNXA-203ENST00000507684 2038 ntBASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 AC005703.6-201ENST00000623265 1329 ntBASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 BX664725.1-201ENST00000438252 379 ntBASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCT8L1PA6NM43 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CCT8L1PA6NM43 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCT8L1PA6NM43 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCT8L1PA6NM43 AC239859.2-201ENST00000444165 318 ntBASIC20.6■□□□□ 0.89
CCT8L1PA6NM43 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.6■□□□□ 0.89
CCT8L1PA6NM43 KRT125P-201ENST00000546827 989 ntBASIC20.6■□□□□ 0.89
CCT8L1PA6NM43 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCT8L1PA6NM43 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCT8L1PA6NM43 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCT8L1PA6NM43 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCT8L1PA6NM43 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCT8L1PA6NM43 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCT8L1PA6NM43 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCT8L1PA6NM43 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCT8L1PA6NM43 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms