Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.41■□□□□ 0.54
COMMD4Q9H0A8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COMMD4Q9H0A8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
COMMD4Q9H0A8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.41■□□□□ 0.54
COMMD4Q9H0A8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.4■□□□□ 0.54
COMMD4Q9H0A8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
COMMD4Q9H0A8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COMMD4Q9H0A8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COMMD4Q9H0A8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 GABARAPL3-202ENST00000624044 1851 ntBASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD4Q9H0A8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COMMD4Q9H0A8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COMMD4Q9H0A8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms