Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 AC231657.2-201ENST00000624556 255 ntBASIC15.42■□□□□ 0.06
RNF183Q96D59 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF183Q96D59 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF183Q96D59 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF183Q96D59 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF183Q96D59 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF183Q96D59 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF183Q96D59 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF183Q96D59 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.42■□□□□ 0.06
RNF183Q96D59 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF183Q96D59 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF183Q96D59 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF183Q96D59 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF183Q96D59 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RNF183Q96D59 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF183Q96D59 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF183Q96D59 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF183Q96D59 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF183Q96D59 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF183Q96D59 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF183Q96D59 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.41■□□□□ 0.06
RNF183Q96D59 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.41■□□□□ 0.06
RNF183Q96D59 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF183Q96D59 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF183Q96D59 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.41■□□□□ 0.06
RNF183Q96D59 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF183Q96D59 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RNF183Q96D59 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF183Q96D59 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RNF183Q96D59 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF183Q96D59 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
RNF183Q96D59 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF183Q96D59 AC092053.2-201ENST00000640557 1818 ntBASIC15.4■□□□□ 0.06
RNF183Q96D59 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF183Q96D59 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF183Q96D59 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RNF183Q96D59 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF183Q96D59 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF183Q96D59 AC007322.1-201ENST00000426983 750 ntBASIC15.4■□□□□ 0.06
RNF183Q96D59 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF183Q96D59 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF183Q96D59 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF183Q96D59 DUX4L16-201ENST00000555130 1264 ntBASIC15.4■□□□□ 0.06
RNF183Q96D59 SLC7A5P1-201ENST00000568957 537 ntBASIC15.4■□□□□ 0.06
RNF183Q96D59 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RNF183Q96D59 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
RNF183Q96D59 AC008175.2-201ENST00000612840 297 ntBASIC15.4■□□□□ 0.06
RNF183Q96D59 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.4■□□□□ 0.06
RNF183Q96D59 AC120498.10-201ENST00000621827 505 ntBASIC15.4■□□□□ 0.06
RNF183Q96D59 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
RNF183Q96D59 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF183Q96D59 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF183Q96D59 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF183Q96D59 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF183Q96D59 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
RNF183Q96D59 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF183Q96D59 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF183Q96D59 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF183Q96D59 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF183Q96D59 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF183Q96D59 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF183Q96D59 HLA-L-209ENST00000420110 1011 ntBASIC15.39■□□□□ 0.05
RNF183Q96D59 CROCCP5-201ENST00000436658 830 ntBASIC15.39■□□□□ 0.05
RNF183Q96D59 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF183Q96D59 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF183Q96D59 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF183Q96D59 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF183Q96D59 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF183Q96D59 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms