Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 AP001330.3-201ENST00000520123 633 ntBASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.35■□□□□ 0.69
DEPDC4Q8N2C3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.34■□□□□ 0.69
DEPDC4Q8N2C3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
DEPDC4Q8N2C3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
DEPDC4Q8N2C3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
DEPDC4Q8N2C3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DEPDC4Q8N2C3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DEPDC4Q8N2C3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 AC105265.2-201ENST00000467189 838 ntBASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 AC233992.3-201ENST00000607491 485 ntBASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 GABARAPL3-202ENST00000624044 1851 ntBASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.32■□□□□ 0.68
DEPDC4Q8N2C3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 BX842568.3-201ENST00000418104 571 ntBASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DEPDC4Q8N2C3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms