Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1AQ71U36 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 ZNRF2P3-201ENST00000424200 374 ntBASIC19.16■□□□□ 0.66
TUBA1AQ71U36 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 TSPY26P-201ENST00000476365 1326 ntBASIC19.16■□□□□ 0.66
TUBA1AQ71U36 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TUBA1AQ71U36 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 OXCT2P1-201ENST00000447263 1535 ntBASIC19.15■□□□□ 0.66
TUBA1AQ71U36 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TUBA1AQ71U36 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TUBA1AQ71U36 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 AL158211.5-201ENST00000623583 2518 ntBASIC19.14■□□□□ 0.65
TUBA1AQ71U36 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TUBA1AQ71U36 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBA1AQ71U36 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBA1AQ71U36 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBA1AQ71U36 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms