Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 EIF4G1-222ENST00000442406 5129 ntTSL 1 (best)12.73□□□□□ -0.374e-7■■■□□ 16.2
LSM11P83369 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.47□□□□□ -0.578e-7■■■□□ 16.2
LSM11P83369 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.53■■□□□ 1.521e-8■■■□□ 16.2
LSM11P83369 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.171e-8■■■□□ 16.2
LSM11P83369 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.788e-8■■■□□ 16.2
LSM11P83369 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.168e-8■■■□□ 16.2
LSM11P83369 PIEZO1-205ENST00000472168 663 ntTSL 213.46□□□□□ -0.251e-9■■■□□ 16.2
LSM11P83369 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.11■□□□□ 0.492e-6■■■□□ 16.2
LSM11P83369 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.142e-6■■■□□ 16.2
LSM11P83369 CALCOCO1-203ENST00000546443 1523 ntTSL 1 (best)14.16□□□□□ -0.147e-9■■■□□ 16.2
LSM11P83369 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC10.23□□□□□ -0.777e-9■■■□□ 16.2
LSM11P83369 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC9.56□□□□□ -0.887e-9■■■□□ 16.2
LSM11P83369 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC8.86□□□□□ -0.997e-9■■■□□ 16.2
LSM11P83369 LARP1-211ENST00000521577 817 ntTSL 521.79■■□□□ 1.085e-7■■■□□ 16.2
LSM11P83369 LARP1-204ENST00000518297 2630 ntTSL 519.37■□□□□ 0.695e-7■■■□□ 16.2
LSM11P83369 LARP1-208ENST00000518892 399 ntTSL 318.63■□□□□ 0.575e-7■■■□□ 16.2
LSM11P83369 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.735e-7■■■□□ 16.2
LSM11P83369 LARP1-202ENST00000517616 501 ntTSL 56.02□□□□□ -1.455e-7■■■□□ 16.2
LSM11P83369 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.525e-7■■■□□ 16.1
LSM11P83369 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.55e-7■■■□□ 16.1
LSM11P83369 FOXN3-204ENST00000553840 555 ntTSL 415.31■□□□□ 0.045e-7■■■□□ 16.1
LSM11P83369 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.55e-7■■■□□ 16.1
LSM11P83369 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.545e-7■■■□□ 16.1
LSM11P83369 FOXN3-206ENST00000554005 450 ntTSL 510.78□□□□□ -0.685e-7■■■□□ 16.1
LSM11P83369 FOXN3-218ENST00000557718 398 ntTSL 510.47□□□□□ -0.735e-7■■■□□ 16.1
LSM11P83369 FOXN3-213ENST00000556916 467 ntTSL 39.5□□□□□ -0.895e-7■■■□□ 16.1
LSM11P83369 FOXN3-210ENST00000555658 648 ntTSL 39.47□□□□□ -0.895e-7■■■□□ 16.1
LSM11P83369 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.125e-7■■■□□ 16.1
LSM11P83369 FOXN3-203ENST00000553353 366 ntTSL 37.94□□□□□ -1.145e-7■■■□□ 16.1
LSM11P83369 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.59e-7■■■□□ 16.1
LSM11P83369 SEMA4G-211ENST00000521006 4656 ntTSL 1 (best)12.08□□□□□ -0.483e-16■■■□□ 16.1
LSM11P83369 SEMA4G-204ENST00000484128 714 ntTSL 29.79□□□□□ -0.843e-16■■■□□ 16.1
LSM11P83369 SEMA4G-212ENST00000613292 1171 ntTSL 1 (best) BASIC9.67□□□□□ -0.863e-16■■■□□ 16.1
LSM11P83369 SEMA4G-201ENST00000210633 4094 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.863e-16■■■□□ 16.1
LSM11P83369 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.52■■□□□ 1.21e-6■■■□□ 16.1
LSM11P83369 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.536e-8■■■□□ 16.1
LSM11P83369 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC11.62□□□□□ -0.556e-8■■■□□ 16.1
LSM11P83369 TMC6-215ENST00000590494 702 ntTSL 210.35□□□□□ -0.757e-11■■■□□ 16.1
LSM11P83369 MTG1-206ENST00000492266 413 ntTSL 29.37□□□□□ -0.912e-9■■■□□ 16.1
LSM11P83369 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.292e-8■■■□□ 16.1
LSM11P83369 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.33■□□□□ 0.212e-8■■■□□ 16.1
LSM11P83369 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.81■□□□□ 0.122e-8■■■□□ 16.1
LSM11P83369 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.32■□□□□ 0.042e-8■■■□□ 16.1
LSM11P83369 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.852e-7■■■□□ 16.1
LSM11P83369 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.492e-7■■■□□ 16.1
LSM11P83369 CDC20-204ENST00000482046 422 ntTSL 29.38□□□□□ -0.912e-7■■■□□ 16.1
LSM11P83369 GABRE-208ENST00000483564 2747 ntTSL 38.73□□□□□ -1.013e-7■■■□□ 16.1
LSM11P83369 GABRE-209ENST00000486255 6176 ntTSL 1 (best)7.89□□□□□ -1.153e-7■■■□□ 16.1
LSM11P83369 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.293e-7■■■□□ 16.1
LSM11P83369 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.168e-8■■■□□ 16.1
LSM11P83369 AMH-202ENST00000589313 1686 ntTSL 521.06■□□□□ 0.968e-8■■■□□ 16.1
LSM11P83369 AMH-203ENST00000592877 534 ntTSL 318.95■□□□□ 0.628e-8■■■□□ 16.1
LSM11P83369 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.667e-8■■■□□ 16.1
LSM11P83369 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.081e-6■■■□□ 16.1
LSM11P83369 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.352e-9■■■□□ 16.1
LSM11P83369 UBAC1-204ENST00000478485 773 ntTSL 221.15■□□□□ 0.982e-9■■■□□ 16.1
LSM11P83369 CAMTA1-207ENST00000472283 384 ntTSL 317.64■□□□□ 0.411e-7■■■□□ 16.1
LSM11P83369 ABCA7-219ENST00000612569 876 ntTSL 314.66□□□□□ -0.065e-7■■■□□ 16.1
LSM11P83369 CAMTA1-203ENST00000461580 826 ntTSL 312.5□□□□□ -0.411e-7■■■□□ 16.1
LSM11P83369 CAMTA1-206ENST00000470648 766 ntTSL 38.29□□□□□ -1.081e-7■■■□□ 16.1
LSM11P83369 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.314e-9■■■□□ 16.1
LSM11P83369 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.414e-9■■■□□ 16.1
LSM11P83369 MICALL2-204ENST00000467394 2080 ntTSL 218.83■□□□□ 0.65e-9■■■□□ 16
LSM11P83369 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.349e-8■■■□□ 16
LSM11P83369 FBXO17-203ENST00000596025 935 ntTSL 217.18■□□□□ 0.349e-8■■■□□ 16
LSM11P83369 FBXO17-205ENST00000599418 2222 ntTSL 215.64■□□□□ 0.099e-8■■■□□ 16
LSM11P83369 FBXO17-204ENST00000597696 932 ntTSL 212.18□□□□□ -0.469e-8■■■□□ 16
LSM11P83369 TCIRG1-214ENST00000533005 1655 ntTSL 520.54■□□□□ 0.884e-7■■■□□ 16
LSM11P83369 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.36■□□□□ 0.534e-7■■■□□ 16
LSM11P83369 TCIRG1-205ENST00000525724 1864 ntTSL 517.92■□□□□ 0.464e-7■■■□□ 16
LSM11P83369 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.264e-7■■■□□ 16
LSM11P83369 INPPL1-202ENST00000320683 717 ntTSL 220.55■□□□□ 0.883e-8■■■□□ 16
LSM11P83369 INPPL1-212ENST00000541752 856 ntTSL 214.76□□□□□ -0.053e-8■■■□□ 16
LSM11P83369 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.342e-6■■■□□ 16
LSM11P83369 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.352e-6■■■□□ 16
LSM11P83369 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.412e-6■■■□□ 16
LSM11P83369 ANK1-209ENST00000520299 3587 ntTSL 29.24□□□□□ -0.932e-6■■■□□ 16
LSM11P83369 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.124e-8■■■□□ 16
LSM11P83369 NEK8-201ENST00000268766 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.814e-8■■■□□ 16
LSM11P83369 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.974e-8■■■□□ 16
LSM11P83369 CEP250-204ENST00000422671 2648 ntTSL 513.1□□□□□ -0.314e-7■■■□□ 16
LSM11P83369 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.013e-7■■■□□ 15.9
LSM11P83369 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.193e-6■■■□□ 15.9
LSM11P83369 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.533e-6■■■□□ 15.9
LSM11P83369 CTBP2-208ENST00000476817 705 ntTSL 318.02■□□□□ 0.483e-6■■■□□ 15.9
LSM11P83369 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.863e-6■■■□□ 15.9
LSM11P83369 CTBP2-212ENST00000530884 578 ntTSL 39.38□□□□□ -0.913e-6■■■□□ 15.9
LSM11P83369 MRPS25-207ENST00000496484 823 ntTSL 28.95□□□□□ -0.983e-6■■■□□ 15.9
LSM11P83369 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.335e-12■■■□□ 15.9
LSM11P83369 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.78■□□□□ 0.65e-12■■■□□ 15.9
LSM11P83369 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.245e-12■■■□□ 15.9
LSM11P83369 AES-206ENST00000586742 1666 ntTSL 316.39■□□□□ 0.215e-12■■■□□ 15.9
LSM11P83369 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.99■□□□□ 0.155e-12■■■□□ 15.9
LSM11P83369 AES-210ENST00000590067 1100 ntTSL 214.76□□□□□ -0.055e-12■■■□□ 15.9
LSM11P83369 AES-209ENST00000587393 1082 ntTSL 214.52□□□□□ -0.095e-12■■■□□ 15.9
LSM11P83369 AES-212ENST00000592414 3274 ntTSL 211.74□□□□□ -0.535e-12■■■□□ 15.9
LSM11P83369 SMARCC1-204ENST00000462198 785 ntTSL 28.43□□□□□ -1.065e-12■■■□□ 15.9
LSM11P83369 AES-211ENST00000592330 275 ntTSL 57.51□□□□□ -1.215e-12■■■□□ 15.9
LSM11P83369 SMARCC1-202ENST00000425518 3827 ntTSL 27.16□□□□□ -1.265e-12■■■□□ 15.9
LSM11P83369 SMARCC1-206ENST00000485737 631 ntTSL 46.99□□□□□ -1.295e-12■■■□□ 15.9
Retrieved 100 of 11,495 protein–RNA pairs in 64.4 ms