RNA–Protein interactions for RNA: ENST00000590494.1

TMC6-215, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 702 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-215ENST00000590494 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
TMC6-215ENST00000590494 ABCC9O60706 1549 aa27.52■■■□□ 2
TMC6-215ENST00000590494 DNAJC5BQ9UF47 199 aa27.09■■□□□ 1.93
TMC6-215ENST00000590494 CCDC180Q9P1Z9 1646 aa26.19■■□□□ 1.78
TMC6-215ENST00000590494 DNAJC5Q9H3Z4 198 aa25.92■■□□□ 1.74
TMC6-215ENST00000590494 RB1CC1Q8TDY2 1594 aa25.58■■□□□ 1.69
TMC6-215ENST00000590494 PABPN1Q86U42 306 aaKnown RBP eCLIP25.35■■□□□ 1.651e-13■□□□□ 9
TMC6-215ENST00000590494 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
TMC6-215ENST00000590494 NACADO15069 1562 aa25.06■■□□□ 1.6
TMC6-215ENST00000590494 CECR2Q9BXF3 1484 aa24.95■■□□□ 1.58
TMC6-215ENST00000590494 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
TMC6-215ENST00000590494 CC2D2AQ9P2K1 1620 aa24.82■■□□□ 1.56
TMC6-215ENST00000590494 DCAF8L2P0C7V8 631 aa24.5■■□□□ 1.51
TMC6-215ENST00000590494 SHROOM4Q9ULL8 1493 aa24.43■■□□□ 1.5
TMC6-215ENST00000590494 EIF4G1Q04637 1599 aaKnown RBP24.41■■□□□ 1.5
TMC6-215ENST00000590494 CUX2O14529 1486 aa24.32■■□□□ 1.48
TMC6-215ENST00000590494 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
TMC6-215ENST00000590494 TRIM41Q8WV44 630 aa24.14■■□□□ 1.45
TMC6-215ENST00000590494 ERCC6Q03468 1493 aa23.84■■□□□ 1.41
TMC6-215ENST00000590494 SCRIBQ14160 1630 aa23.73■■□□□ 1.39
TMC6-215ENST00000590494 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
TMC6-215ENST00000590494 ZCCHC6Q5VYS8 1495 aaKnown RBP23.38■■□□□ 1.33
TMC6-215ENST00000590494 THOC2Q8NI27 1593 aaKnown RBP23.35■■□□□ 1.33
TMC6-215ENST00000590494 NESP48681 1621 aa23.25■■□□□ 1.31
TMC6-215ENST00000590494 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
TMC6-215ENST00000590494 AEBP2Q6ZN18 517 aaPredicted RBP23.06■■□□□ 1.28
TMC6-215ENST00000590494 SMARCA2P51531 1590 aa23.03■■□□□ 1.28
TMC6-215ENST00000590494 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
TMC6-215ENST00000590494 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
TMC6-215ENST00000590494 OSCARQ8IYS5 282 aa22.91■■□□□ 1.26
TMC6-215ENST00000590494 ATAD2BQ9ULI0 1458 aa22.87■■□□□ 1.25
TMC6-215ENST00000590494 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
TMC6-215ENST00000590494 LAMC3Q9Y6N6 1575 aa22.86■■□□□ 1.25
TMC6-215ENST00000590494 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
TMC6-215ENST00000590494 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
TMC6-215ENST00000590494 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
TMC6-215ENST00000590494 PDS5BQ9NTI5 1447 aa22.74■■□□□ 1.23
TMC6-215ENST00000590494 WDR62O43379 1518 aa22.67■■□□□ 1.22
TMC6-215ENST00000590494 TRHP20396 242 aaPredicted RBP22.66■■□□□ 1.22
TMC6-215ENST00000590494 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
TMC6-215ENST00000590494 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
TMC6-215ENST00000590494 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
TMC6-215ENST00000590494 SMARCA4P51532 1647 aa22.51■■□□□ 1.19
TMC6-215ENST00000590494 CYB5RLQ6IPT4 315 aa22.47■■□□□ 1.19
TMC6-215ENST00000590494 ILDR1Q86SU0 546 aaPredicted RBP22.4■■□□□ 1.18
TMC6-215ENST00000590494 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
TMC6-215ENST00000590494 PEG3Q9GZU2 1588 aa22.32■■□□□ 1.16
TMC6-215ENST00000590494 ARAP1Q96P48 1450 aa22.3■■□□□ 1.16
TMC6-215ENST00000590494 CEP164Q9UPV0 1460 aa22.27■■□□□ 1.16
TMC6-215ENST00000590494 FANCD2Q9BXW9 1451 aa22.11■■□□□ 1.13
TMC6-215ENST00000590494 URB2Q14146 1524 aaKnown RBP22.05■■□□□ 1.12
TMC6-215ENST00000590494 RSF1Q96T23 1441 aaPredicted RBP22.02■■□□□ 1.12
TMC6-215ENST00000590494 ZNF608Q9ULD9 1512 aaPredicted RBP22■■□□□ 1.11
TMC6-215ENST00000590494 CHD1O14646 1710 aa21.95■■□□□ 1.1
TMC6-215ENST00000590494 MROH2BQ7Z745 1585 aa21.9■■□□□ 1.1
TMC6-215ENST00000590494 IFT140Q96RY7 1462 aa21.88■■□□□ 1.09
TMC6-215ENST00000590494 EIF4G3O43432 1585 aaKnown RBP21.83■■□□□ 1.09
TMC6-215ENST00000590494 CFTRP13569 1480 aa21.82■■□□□ 1.08
TMC6-215ENST00000590494 FBLN2P98095 1184 aa21.68■■□□□ 1.06
TMC6-215ENST00000590494 CLASP1Q7Z460 1538 aa21.65■■□□□ 1.06
TMC6-215ENST00000590494 KDM4FA0A1W2PPD8 638 aa21.6■■□□□ 1.05
TMC6-215ENST00000590494 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.052e-20■■■■□ 21.2
TMC6-215ENST00000590494 WIZO95785 1651 aa21.57■■□□□ 1.04
TMC6-215ENST00000590494 TOPBP1Q92547 1522 aa21.55■■□□□ 1.04
TMC6-215ENST00000590494 PRDM2Q13029 1718 aa21.54■■□□□ 1.04
TMC6-215ENST00000590494 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
TMC6-215ENST00000590494 TARBP1Q13395 1621 aaKnown RBP21.5■■□□□ 1.03
TMC6-215ENST00000590494 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
TMC6-215ENST00000590494 KIF13AQ9H1H9 1805 aa21.46■■□□□ 1.03
TMC6-215ENST00000590494 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
TMC6-215ENST00000590494 ABCC8Q09428 1581 aa21.38■■□□□ 1.01
TMC6-215ENST00000590494 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
TMC6-215ENST00000590494 SNAPC4Q5SXM2 1469 aa21.34■■□□□ 1.01
TMC6-215ENST00000590494 FBXO41Q8TF61 875 aa21.32■■□□□ 1
TMC6-215ENST00000590494 HECW2Q9P2P5 1572 aa21.31■■□□□ 1
TMC6-215ENST00000590494 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
TMC6-215ENST00000590494 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
TMC6-215ENST00000590494 MAGI1Q96QZ7 1491 aaPredicted RBP21.23■□□□□ 0.99
TMC6-215ENST00000590494 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
TMC6-215ENST00000590494 LMTK3Q96Q04 1460 aa21.22■□□□□ 0.99
TMC6-215ENST00000590494 KDM6BO15054 1643 aa21.21■□□□□ 0.99
TMC6-215ENST00000590494 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
TMC6-215ENST00000590494 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
TMC6-215ENST00000590494 RAD54L2Q9Y4B4 1467 aa21.17■□□□□ 0.98
TMC6-215ENST00000590494 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
TMC6-215ENST00000590494 ADGRL1O94910 1474 aa21.11■□□□□ 0.97
TMC6-215ENST00000590494 ABCC10Q5T3U5 1492 aa21.09■□□□□ 0.97
TMC6-215ENST00000590494 FAM69CQ0P6D2 419 aa21.09■□□□□ 0.97
TMC6-215ENST00000590494 SOCS7O14512 581 aa21.08■□□□□ 0.97
TMC6-215ENST00000590494 SOGA1O94964 1423 aa21.08■□□□□ 0.97
TMC6-215ENST00000590494 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
TMC6-215ENST00000590494 DIP2BQ9P265 1576 aa21.02■□□□□ 0.96
TMC6-215ENST00000590494 CEP170Q5SW79 1584 aa21.02■□□□□ 0.95
TMC6-215ENST00000590494 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
TMC6-215ENST00000590494 ILDR2Q71H61 639 aa20.96■□□□□ 0.95
TMC6-215ENST00000590494 PBRM1Q86U86 1689 aa20.95■□□□□ 0.94
TMC6-215ENST00000590494 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
TMC6-215ENST00000590494 MAPKBP1O60336 1514 aa20.94■□□□□ 0.94
TMC6-215ENST00000590494 TSPOAP1O95153 1857 aa20.94■□□□□ 0.94
TMC6-215ENST00000590494 SHROOM2Q13796 1616 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms