RNA–Protein interactions for RNA: ENST00000330459.7

KPNA2-201, Transcript of karyopherin subunit alpha 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA2, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA2-201ENST00000330459 NISCHQ9Y2I1 1504 aa20.89■□□□□ 0.93
KPNA2-201ENST00000330459 CCDC180Q9P1Z9 1646 aa17.97■□□□□ 0.47
KPNA2-201ENST00000330459 ZCCHC6Q5VYS8 1495 aaKnown RBP17.59■□□□□ 0.41
KPNA2-201ENST00000330459 SHROOM4Q9ULL8 1493 aa17.39■□□□□ 0.37
KPNA2-201ENST00000330459 DCAF8L2P0C7V8 631 aa17.29■□□□□ 0.36
KPNA2-201ENST00000330459 DCAF1Q9Y4B6 1507 aa17.24■□□□□ 0.35
KPNA2-201ENST00000330459 SUPT5HO00267 1087 aaKnown RBP16.95■□□□□ 0.3
KPNA2-201ENST00000330459 MYO15BQ96JP2 1530 aa16.89■□□□□ 0.3
KPNA2-201ENST00000330459 ABCC9O60706 1549 aa16.78■□□□□ 0.28
KPNA2-201ENST00000330459 NACADO15069 1562 aa16.7■□□□□ 0.26
KPNA2-201ENST00000330459 SCRIBQ14160 1630 aa16.64■□□□□ 0.25
KPNA2-201ENST00000330459 RB1CC1Q8TDY2 1594 aa16.47■□□□□ 0.23
KPNA2-201ENST00000330459 CHIC1Q5VXU3 224 aa16.38■□□□□ 0.21
KPNA2-201ENST00000330459 RSF1Q96T23 1441 aaPredicted RBP16.37■□□□□ 0.21
KPNA2-201ENST00000330459 CECR2Q9BXF3 1484 aa16.23■□□□□ 0.19
KPNA2-201ENST00000330459 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
KPNA2-201ENST00000330459 UNC13AQ9UPW8 1703 aa16.12■□□□□ 0.17
KPNA2-201ENST00000330459 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
KPNA2-201ENST00000330459 WIZO95785 1651 aa16.04■□□□□ 0.16
KPNA2-201ENST00000330459 BICRAQ9NZM4 1560 aa15.97■□□□□ 0.15
KPNA2-201ENST00000330459 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.14
KPNA2-201ENST00000330459 SMARCA4P51532 1647 aa15.96■□□□□ 0.14
KPNA2-201ENST00000330459 TRIM41Q8WV44 630 aa15.89■□□□□ 0.13
KPNA2-201ENST00000330459 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
KPNA2-201ENST00000330459 LOC105371045A0A1W2PR82 267 aa15.81■□□□□ 0.12
KPNA2-201ENST00000330459 CCDC88BA6NC98 1476 aa15.76■□□□□ 0.11
KPNA2-201ENST00000330459 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
KPNA2-201ENST00000330459 PEG3Q9GZU2 1588 aa15.73■□□□□ 0.11
KPNA2-201ENST00000330459 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
KPNA2-201ENST00000330459 ATAD2BQ9ULI0 1458 aa15.64■□□□□ 0.09
KPNA2-201ENST00000330459 FAM9AQ8IZU1 332 aaPredicted RBP15.63■□□□□ 0.09
KPNA2-201ENST00000330459 BAZ1BQ9UIG0 1483 aaKnown RBP15.57■□□□□ 0.08
KPNA2-201ENST00000330459 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
KPNA2-201ENST00000330459 PCGF6Q9BYE7 350 aa15.48■□□□□ 0.07
KPNA2-201ENST00000330459 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
KPNA2-201ENST00000330459 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
KPNA2-201ENST00000330459 HMGXB3Q12766 1538 aa15.4■□□□□ 0.06
KPNA2-201ENST00000330459 WRNQ14191 1432 aaPredicted RBP eCLIP15.4■□□□□ 0.06
KPNA2-201ENST00000330459 TRIM26Q12899 539 aaPredicted RBP15.36■□□□□ 0.05
KPNA2-201ENST00000330459 EEA1Q15075 1411 aa15.36■□□□□ 0.05
KPNA2-201ENST00000330459 SOGA1O94964 1423 aa15.35■□□□□ 0.05
KPNA2-201ENST00000330459 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
KPNA2-201ENST00000330459 HRCP23327 699 aa15.3■□□□□ 0.04
KPNA2-201ENST00000330459 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
KPNA2-201ENST00000330459 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
KPNA2-201ENST00000330459 TNIKQ9UKE5 1360 aa15.21■□□□□ 0.03
KPNA2-201ENST00000330459 CFTRP13569 1480 aa15.2■□□□□ 0.02
KPNA2-201ENST00000330459 TOP2BQ02880 1626 aa15.19■□□□□ 0.02
KPNA2-201ENST00000330459 UBTFP17480 764 aaKnown RBP15.17■□□□□ 0.02
KPNA2-201ENST00000330459 GOLGA3Q08378 1498 aa15.17■□□□□ 0.02
KPNA2-201ENST00000330459 CC2D2AQ9P2K1 1620 aa15.15■□□□□ 0.02
KPNA2-201ENST00000330459 CEP162Q5TB80 1403 aa15.15■□□□□ 0.02
KPNA2-201ENST00000330459 BIVM-ERCC5R4GMW8 1640 aa15.15■□□□□ 0.02
KPNA2-201ENST00000330459 CEP164Q9UPV0 1460 aa15.13■□□□□ 0.01
KPNA2-201ENST00000330459 KIF21BO75037 1637 aa15.1■□□□□ 0.01
KPNA2-201ENST00000330459 CADPSQ9ULU8 1353 aa15.1■□□□□ 0.01
KPNA2-201ENST00000330459 CUX1P39880 1505 aa15.08■□□□□ 0
KPNA2-201ENST00000330459 PRDM2Q13029 1718 aa15.05■□□□□ 0
KPNA2-201ENST00000330459 PPARGC1BQ86YN6 1023 aaKnown RBP15.05■□□□□ -0
KPNA2-201ENST00000330459 AEBP2Q6ZN18 517 aaPredicted RBP15.02□□□□□ -0.01
KPNA2-201ENST00000330459 RAPGEF2Q9Y4G8 1499 aa15□□□□□ -0.01
KPNA2-201ENST00000330459 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
KPNA2-201ENST00000330459 CLIP1P30622 1438 aa14.96□□□□□ -0.01
KPNA2-201ENST00000330459 PRXQ9BXM0 1461 aa14.96□□□□□ -0.01
KPNA2-201ENST00000330459 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
KPNA2-201ENST00000330459 ZEB1P37275 1124 aaPredicted RBP14.94□□□□□ -0.02
KPNA2-201ENST00000330459 FANCD2Q9BXW9 1451 aa14.92□□□□□ -0.02
KPNA2-201ENST00000330459 FGD5Q6ZNL6 1462 aa14.87□□□□□ -0.03
KPNA2-201ENST00000330459 VPS8Q8N3P4 1428 aa14.86□□□□□ -0.03
KPNA2-201ENST00000330459 CUX2O14529 1486 aa14.86□□□□□ -0.03
KPNA2-201ENST00000330459 TTBK1Q5TCY1 1321 aaPredicted RBP14.85□□□□□ -0.03
KPNA2-201ENST00000330459 NESP48681 1621 aa14.84□□□□□ -0.03
KPNA2-201ENST00000330459 RANGAP1P46060 587 aaPredicted RBP14.84□□□□□ -0.03
KPNA2-201ENST00000330459 IGF1RP08069 1367 aa14.83□□□□□ -0.03
KPNA2-201ENST00000330459 LAMC3Q9Y6N6 1575 aa14.83□□□□□ -0.04
KPNA2-201ENST00000330459 APLP2Q06481 763 aa14.81□□□□□ -0.04
KPNA2-201ENST00000330459 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
KPNA2-201ENST00000330459 TOPBP1Q92547 1522 aa14.79□□□□□ -0.04
KPNA2-201ENST00000330459 CARMIL1Q5VZK9 1371 aa14.77□□□□□ -0.05
KPNA2-201ENST00000330459 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
KPNA2-201ENST00000330459 DNAJC5BQ9UF47 199 aa14.74□□□□□ -0.05
KPNA2-201ENST00000330459 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
KPNA2-201ENST00000330459 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
KPNA2-201ENST00000330459 ABCA10Q8WWZ4 1543 aa14.73□□□□□ -0.05
KPNA2-201ENST00000330459 RAD54L2Q9Y4B4 1467 aa14.73□□□□□ -0.05
KPNA2-201ENST00000330459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.71□□□□□ -0.05
KPNA2-201ENST00000330459 CCER1Q8TC90 406 aaPredicted RBP14.71□□□□□ -0.05
KPNA2-201ENST00000330459 URB2Q14146 1524 aaKnown RBP14.7□□□□□ -0.06
KPNA2-201ENST00000330459 ARHGAP35Q9NRY4 1499 aa14.68□□□□□ -0.06
KPNA2-201ENST00000330459 CUL7Q14999 1698 aa14.61□□□□□ -0.07
KPNA2-201ENST00000330459 KIF21AQ7Z4S6 1674 aa14.6□□□□□ -0.07
KPNA2-201ENST00000330459 WDR97A6NE52 1622 aa14.59□□□□□ -0.07
KPNA2-201ENST00000330459 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
KPNA2-201ENST00000330459 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.07
KPNA2-201ENST00000330459 TDRD9Q8NDG6 1382 aaKnown RBP14.58□□□□□ -0.08
KPNA2-201ENST00000330459 GAPVD1Q14C86 1478 aa14.56□□□□□ -0.08
KPNA2-201ENST00000330459 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
KPNA2-201ENST00000330459 FHAD1B1AJZ9 1412 aa14.53□□□□□ -0.08
KPNA2-201ENST00000330459 MAP3K1Q13233 1512 aa14.52□□□□□ -0.08
KPNA2-201ENST00000330459 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms