Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 AC079089.2-201ENST00000531211 1277 ntBASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 AC004408.2-201ENST00000623613 2777 ntBASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 AL512408.1-201ENST00000569378 2000 ntBASIC15.72■□□□□ 0.11
TRAV9-1A0A075B6T8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV9-1A0A075B6T8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV9-1A0A075B6T8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TRAV9-1A0A075B6T8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TRAV9-1A0A075B6T8 AC112907.3-201ENST00000577781 2400 ntBASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 LONRF2P2-201ENST00000439212 571 ntBASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV9-1A0A075B6T8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 OR7E47P-201ENST00000546390 1422 ntBASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 AL592293.1-201ENST00000502889 1188 ntBASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV9-1A0A075B6T8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 AC022616.5-201ENST00000518796 181 ntBASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms