Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 AP001160.3-201ENST00000601484 763 ntBASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.88■□□□□ 0.93
SCN8AQ9UQD0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 CLDN5-201ENST00000403084 2357 ntBASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN8AQ9UQD0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN8AQ9UQD0 AC104771.1-201ENST00000603335 964 ntBASIC20.86■□□□□ 0.93
SCN8AQ9UQD0 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.86■□□□□ 0.93
SCN8AQ9UQD0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.86■□□□□ 0.93
SCN8AQ9UQD0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN8AQ9UQD0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN8AQ9UQD0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN8AQ9UQD0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.86■□□□□ 0.93
SCN8AQ9UQD0 AC080038.1-201ENST00000611274 1154 ntBASIC20.86■□□□□ 0.93
SCN8AQ9UQD0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN8AQ9UQD0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SCN8AQ9UQD0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 AF106564.1-201ENST00000607058 2553 ntBASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 RBM17P2-201ENST00000616397 1405 ntBASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 DUX4L16-201ENST00000555130 1264 ntBASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.85■□□□□ 0.93
SCN8AQ9UQD0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SCN8AQ9UQD0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN8AQ9UQD0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
SCN8AQ9UQD0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.84■□□□□ 0.93
SCN8AQ9UQD0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SCN8AQ9UQD0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SCN8AQ9UQD0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SCN8AQ9UQD0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCN8AQ9UQD0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCN8AQ9UQD0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SCN8AQ9UQD0 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.84■□□□□ 0.93
SCN8AQ9UQD0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCN8AQ9UQD0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN8AQ9UQD0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SCN8AQ9UQD0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN8AQ9UQD0 KRT18P11-201ENST00000435214 1283 ntBASIC20.83■□□□□ 0.93
SCN8AQ9UQD0 CROCCP5-201ENST00000436658 830 ntBASIC20.83■□□□□ 0.93
SCN8AQ9UQD0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.83■□□□□ 0.93
SCN8AQ9UQD0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.83■□□□□ 0.93
SCN8AQ9UQD0 BID-214ENST00000617586 542 ntTSL 5 BASIC20.83■□□□□ 0.93
SCN8AQ9UQD0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCN8AQ9UQD0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.83■□□□□ 0.93
SCN8AQ9UQD0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.83■□□□□ 0.93
SCN8AQ9UQD0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN8AQ9UQD0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN8AQ9UQD0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SCN8AQ9UQD0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN8AQ9UQD0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.83■□□□□ 0.92
SCN8AQ9UQD0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN8AQ9UQD0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN8AQ9UQD0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.83■□□□□ 0.92
SCN8AQ9UQD0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.83■□□□□ 0.92
SCN8AQ9UQD0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SCN8AQ9UQD0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SCN8AQ9UQD0 AC007375.3-201ENST00000600936 2314 ntBASIC20.82■□□□□ 0.92
SCN8AQ9UQD0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.82■□□□□ 0.92
SCN8AQ9UQD0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN8AQ9UQD0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SCN8AQ9UQD0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN8AQ9UQD0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.82■□□□□ 0.92
SCN8AQ9UQD0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.82■□□□□ 0.92
SCN8AQ9UQD0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
SCN8AQ9UQD0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.82■□□□□ 0.92
SCN8AQ9UQD0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN8AQ9UQD0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms