Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 ATP13A1-215ENST00000497762 575 ntTSL 225.23■■□□□ 1.638e-9■■□□□ 12.9
PABPN1Q86U42 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC46.72■■■■■ 5.071e-7■■□□□ 12.9
PABPN1Q86U42 SLC25A10-207ENST00000574129 1523 ntTSL 558.14■■■■■ 6.91e-6■■□□□ 12.9
PABPN1Q86U42 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC48.41■■■■■ 5.341e-6■■□□□ 12.9
PABPN1Q86U42 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC44.34■■■■■ 4.691e-6■■□□□ 12.9
PABPN1Q86U42 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC37.24■■■■□ 3.551e-6■■□□□ 12.9
PABPN1Q86U42 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.321e-6■■□□□ 12.9
PABPN1Q86U42 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.677e-7■■□□□ 12.9
PABPN1Q86U42 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.487e-7■■□□□ 12.9
PABPN1Q86U42 MST1-205ENST00000480268 648 ntTSL 334.33■■■■□ 3.093e-13■■□□□ 12.9
PABPN1Q86U42 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC34.46■■■■□ 3.119e-7■■□□□ 12.9
PABPN1Q86U42 BAX-204ENST00000356483 677 ntTSL 1 (best)34.46■■■■□ 3.119e-7■■□□□ 12.9
PABPN1Q86U42 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC34.46■■■■□ 3.119e-7■■□□□ 12.9
PABPN1Q86U42 BAX-209ENST00000506183 383 ntTSL 1 (best)34.15■■■■□ 3.069e-7■■□□□ 12.9
PABPN1Q86U42 GPS1-210ENST00000580141 924 ntTSL 531.15■■■□□ 2.585e-7■■□□□ 12.9
PABPN1Q86U42 PEBP1-202ENST00000542939 708 ntTSL 331.55■■■□□ 2.646e-11■■□□□ 12.9
PABPN1Q86U42 TTLL3-224ENST00000471058 543 ntTSL 220.42■□□□□ 0.867e-7■■□□□ 12.9
PABPN1Q86U42 TTLL3-230ENST00000493241 762 ntTSL 316.93■□□□□ 0.37e-7■■□□□ 12.9
PABPN1Q86U42 CTAGE5-215ENST00000556593 605 ntTSL 311.65□□□□□ -0.549e-7■■□□□ 12.8
PABPN1Q86U42 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.493e-6■■□□□ 12.8
PABPN1Q86U42 INTS11-234ENST00000527383 668 ntTSL 327.61■■■□□ 2.013e-7■■□□□ 12.8
PABPN1Q86U42 THOC5-217ENST00000492707 550 ntTSL 38.84□□□□□ -0.993e-8■■□□□ 12.8
PABPN1Q86U42 PFKL-207ENST00000474114 6007 ntTSL 1 (best)24.12■■□□□ 1.455e-7■■□□□ 12.8
PABPN1Q86U42 VPS16-208ENST00000487461 634 ntTSL 525.44■■□□□ 1.666e-7■■□□□ 12.8
PABPN1Q86U42 COL9A3-207ENST00000467819 993 ntTSL 1 (best)43.98■■■■■ 4.639e-12■■□□□ 12.8
PABPN1Q86U42 MINK1-211ENST00000575511 621 ntTSL 232.25■■■□□ 2.752e-12■■□□□ 12.8
PABPN1Q86U42 SMPD4-219ENST00000491128 2570 ntTSL 1 (best)24.83■■□□□ 1.562e-6■■□□□ 12.8
PABPN1Q86U42 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.382e-6■■□□□ 12.8
PABPN1Q86U42 SMPD4-205ENST00000431183 3614 ntTSL 2 BASIC19.77■□□□□ 0.752e-6■■□□□ 12.8
PABPN1Q86U42 SMPD4-213ENST00000454468 3586 ntTSL 1 (best)19.21■□□□□ 0.672e-6■■□□□ 12.8
PABPN1Q86U42 SMPD4-218ENST00000482171 4298 ntTSL 217.69■□□□□ 0.422e-6■■□□□ 12.8
PABPN1Q86U42 SMPD4-203ENST00000412570 3601 ntTSL 217.45■□□□□ 0.382e-6■■□□□ 12.8
PABPN1Q86U42 SMPD4-206ENST00000433118 3335 ntTSL 517.42■□□□□ 0.382e-6■■□□□ 12.8
PABPN1Q86U42 SMPD4-201ENST00000351288 3661 ntTSL 2 BASIC16.91■□□□□ 0.32e-6■■□□□ 12.8
PABPN1Q86U42 SMPD4-209ENST00000439886 3371 ntTSL 216.41■□□□□ 0.222e-6■■□□□ 12.8
PABPN1Q86U42 UBR4-203ENST00000375225 1533 ntTSL 2 BASIC20.76■□□□□ 0.912e-8■■□□□ 12.8
PABPN1Q86U42 CTAGE5-209ENST00000553383 1010 ntTSL 215.29■□□□□ 0.043e-8■■□□□ 12.8
PABPN1Q86U42 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC41■■■■■ 4.151e-14■■□□□ 12.8
PABPN1Q86U42 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC35.65■■■■□ 3.31e-14■■□□□ 12.8
PABPN1Q86U42 INTS4-211ENST00000535943 1382 ntTSL 5 BASIC16.53■□□□□ 0.241e-9■■□□□ 12.8
PABPN1Q86U42 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.341e-9■■□□□ 12.8
PABPN1Q86U42 INTS4-201ENST00000433818 3459 ntTSL 1 (best)10.14□□□□□ -0.791e-9■■□□□ 12.8
PABPN1Q86U42 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC45.89■■■■■ 4.946e-6■■□□□ 12.8
PABPN1Q86U42 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC40.66■■■■■ 4.16e-6■■□□□ 12.8
PABPN1Q86U42 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC38.06■■■■□ 3.686e-6■■□□□ 12.8
PABPN1Q86U42 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.586e-6■■□□□ 12.8
PABPN1Q86U42 HOOK2-212ENST00000589400 1097 ntTSL 536.23■■■■□ 3.396e-6■■□□□ 12.8
PABPN1Q86U42 PPP1R3E-206ENST00000560913 932 ntTSL 235.6■■■■□ 3.296e-6■■□□□ 12.8
PABPN1Q86U42 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.216e-6■■□□□ 12.8
PABPN1Q86U42 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC34.94■■■■□ 3.186e-6■■□□□ 12.8
PABPN1Q86U42 POLG-208ENST00000530292 1326 ntTSL 534.75■■■■□ 3.156e-6■■□□□ 12.8
PABPN1Q86U42 POLG-209ENST00000530715 372 ntTSL 334.47■■■■□ 3.116e-6■■□□□ 12.8
PABPN1Q86U42 MDC1-206ENST00000489540 1402 ntTSL 234.23■■■■□ 3.076e-6■■□□□ 12.8
PABPN1Q86U42 EIF2B4-204ENST00000418146 742 ntTSL 533.11■■■□□ 2.896e-6■■□□□ 12.8
PABPN1Q86U42 FANCA-222ENST00000567205 413 ntTSL 1 (best)32.7■■■□□ 2.833e-11■■□□□ 12.8
PABPN1Q86U42 DMPK-214ENST00000598191 732 ntTSL 332.61■■■□□ 2.816e-6■■□□□ 12.8
PABPN1Q86U42 ACAP3-211ENST00000479108 485 ntTSL 332.21■■■□□ 2.756e-6■■□□□ 12.8
PABPN1Q86U42 PPP1R12C-203ENST00000586197 472 ntTSL 532.17■■■□□ 2.743e-11■■□□□ 12.8
PABPN1Q86U42 DMPK-211ENST00000596920 382 ntTSL 331.49■■■□□ 2.636e-6■■□□□ 12.8
PABPN1Q86U42 PPP1R3E-209ENST00000561437 690 ntTSL 230.75■■■□□ 2.516e-6■■□□□ 12.8
PABPN1Q86U42 TBCD-216ENST00000574886 883 ntTSL 530.54■■■□□ 2.486e-6■■□□□ 12.8
PABPN1Q86U42 ACAP3-210ENST00000478065 2393 ntTSL 330.17■■■□□ 2.426e-6■■□□□ 12.8
PABPN1Q86U42 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC29.91■■■□□ 2.386e-6■■□□□ 12.8
PABPN1Q86U42 RASSF4-202ENST00000427758 528 ntTSL 329.51■■■□□ 2.316e-6■■□□□ 12.8
PABPN1Q86U42 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC29.28■■■□□ 2.286e-6■■□□□ 12.8
PABPN1Q86U42 ACY1-204ENST00000468068 654 ntTSL 429.17■■■□□ 2.266e-6■■□□□ 12.8
PABPN1Q86U42 RASSF4-209ENST00000483709 734 ntTSL 528.61■■■□□ 2.176e-6■■□□□ 12.8
PABPN1Q86U42 PPP1R3E-207ENST00000561178 1594 ntTSL 227.26■■□□□ 1.966e-6■■□□□ 12.8
PABPN1Q86U42 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)26.97■■□□□ 1.916e-6■■□□□ 12.8
PABPN1Q86U42 RASSF4-205ENST00000465735 2207 ntTSL 226.12■■□□□ 1.776e-6■■□□□ 12.8
PABPN1Q86U42 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.746e-6■■□□□ 12.8
PABPN1Q86U42 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC25.88■■□□□ 1.736e-6■■□□□ 12.8
PABPN1Q86U42 ABHD14A-ACY1-213ENST00000636264 516 ntTSL 525.68■■□□□ 1.76e-6■■□□□ 12.8
PABPN1Q86U42 TBCD-224ENST00000576760 1059 ntTSL 525.68■■□□□ 1.76e-6■■□□□ 12.8
PABPN1Q86U42 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC25.48■■□□□ 1.676e-6■■□□□ 12.8
PABPN1Q86U42 NIT2-203ENST00000465368 1469 ntTSL 1 (best)24.46■■□□□ 1.516e-6■■□□□ 12.8
PABPN1Q86U42 HSD17B4-203ENST00000442060 2686 ntTSL 524■■□□□ 1.434e-6■■□□□ 12.8
PABPN1Q86U42 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.436e-6■■□□□ 12.8
PABPN1Q86U42 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC23.65■■□□□ 1.386e-6■■□□□ 12.8
PABPN1Q86U42 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC23.57■■□□□ 1.364e-6■■□□□ 12.8
PABPN1Q86U42 RASSF4-207ENST00000471941 2275 ntTSL 223.57■■□□□ 1.366e-6■■□□□ 12.8
PABPN1Q86U42 CARM1-203ENST00000586221 2766 ntTSL 1 (best)23.56■■□□□ 1.366e-6■■□□□ 12.8
PABPN1Q86U42 TBCD-210ENST00000572953 702 ntTSL 522.79■■□□□ 1.246e-6■■□□□ 12.8
PABPN1Q86U42 POLG-215ENST00000635986 2351 ntTSL 522.47■■□□□ 1.196e-6■■□□□ 12.8
PABPN1Q86U42 PPP1R3E-204ENST00000559942 1187 ntTSL 1 (best)22.38■■□□□ 1.176e-6■■□□□ 12.8
PABPN1Q86U42 SLC35E2B-201ENST00000480991 2860 ntTSL 222.28■■□□□ 1.166e-6■■□□□ 12.8
PABPN1Q86U42 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.136e-6■■□□□ 12.8
PABPN1Q86U42 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC22.05■■□□□ 1.124e-6■■□□□ 12.8
PABPN1Q86U42 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC22.02■■□□□ 1.124e-6■■□□□ 12.8
PABPN1Q86U42 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.14e-6■■□□□ 12.8
PABPN1Q86U42 TBCD-213ENST00000574422 879 ntTSL 221.76■■□□□ 1.076e-6■■□□□ 12.8
PABPN1Q86U42 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.046e-6■■□□□ 12.8
PABPN1Q86U42 CDCA7-204ENST00000410101 1369 ntTSL 2 BASIC21.11■□□□□ 0.976e-6■■□□□ 12.8
PABPN1Q86U42 PPP1R3E-203ENST00000559314 2351 ntTSL 220.96■□□□□ 0.956e-6■■□□□ 12.8
PABPN1Q86U42 TBCD-217ENST00000574975 867 ntTSL 520.91■□□□□ 0.946e-6■■□□□ 12.8
PABPN1Q86U42 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.916e-6■■□□□ 12.8
PABPN1Q86U42 AFMID-203ENST00000585419 493 ntTSL 320.06■□□□□ 0.86e-6■■□□□ 12.8
PABPN1Q86U42 POLG-213ENST00000631044 4668 ntTSL 519.63■□□□□ 0.736e-6■■□□□ 12.8
PABPN1Q86U42 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.626e-6■■□□□ 12.8
PABPN1Q86U42 PPP1R3E-202ENST00000558058 3222 ntTSL 318.79■□□□□ 0.66e-6■■□□□ 12.8
Retrieved 100 of 8,254 protein–RNA pairs in 358.8 ms