RNA–Protein interactions for RNA: ENST00000483709.6

RASSF4-209, Transcript of Ras association domain family member 4, humanhuman

TSL 5

Gene RASSF4, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF4-209ENST00000483709 NISCHQ9Y2I1 1504 aa35.33■■■■□ 3.25
RASSF4-209ENST00000483709 CCDC180Q9P1Z9 1646 aa31.31■■■□□ 2.6
RASSF4-209ENST00000483709 ABCC9O60706 1549 aa30.55■■■□□ 2.48
RASSF4-209ENST00000483709 DCAF8L2P0C7V8 631 aa29.59■■■□□ 2.33
RASSF4-209ENST00000483709 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
RASSF4-209ENST00000483709 RB1CC1Q8TDY2 1594 aa29.42■■■□□ 2.3
RASSF4-209ENST00000483709 NACADO15069 1562 aa29.41■■■□□ 2.3
RASSF4-209ENST00000483709 MYO15BQ96JP2 1530 aa29.24■■■□□ 2.27
RASSF4-209ENST00000483709 DCAF1Q9Y4B6 1507 aa29.2■■■□□ 2.26
RASSF4-209ENST00000483709 UNC13AQ9UPW8 1703 aa28.75■■■□□ 2.19
RASSF4-209ENST00000483709 SCRIBQ14160 1630 aa28.65■■■□□ 2.18
RASSF4-209ENST00000483709 PABPN1Q86U42 306 aaKnown RBP eCLIP28.61■■■□□ 2.176e-6■■□□□ 12.8
RASSF4-209ENST00000483709 BICRAQ9NZM4 1560 aa28.51■■■□□ 2.15
RASSF4-209ENST00000483709 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
RASSF4-209ENST00000483709 DNAJC5BQ9UF47 199 aa27.88■■■□□ 2.05
RASSF4-209ENST00000483709 EIF4G1Q04637 1599 aaKnown RBP27.76■■■□□ 2.03
RASSF4-209ENST00000483709 CC2D2AQ9P2K1 1620 aa27.62■■■□□ 2.01
RASSF4-209ENST00000483709 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
RASSF4-209ENST00000483709 SMARCA4P51532 1647 aa27.38■■□□□ 1.97
RASSF4-209ENST00000483709 BAZ1AQ9NRL2 1556 aaPredicted RBP27.37■■□□□ 1.97
RASSF4-209ENST00000483709 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
RASSF4-209ENST00000483709 ATAD2BQ9ULI0 1458 aa27.19■■□□□ 1.94
RASSF4-209ENST00000483709 SMARCA2P51531 1590 aa27.16■■□□□ 1.94
RASSF4-209ENST00000483709 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
RASSF4-209ENST00000483709 PEG3Q9GZU2 1588 aa27.07■■□□□ 1.92
RASSF4-209ENST00000483709 HMGXB3Q12766 1538 aa27■■□□□ 1.91
RASSF4-209ENST00000483709 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
RASSF4-209ENST00000483709 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
RASSF4-209ENST00000483709 WIZO95785 1651 aa26.98■■□□□ 1.91
RASSF4-209ENST00000483709 TOP2AP11388 1531 aaKnown RBP26.68■■□□□ 1.86
RASSF4-209ENST00000483709 SUPT5HO00267 1087 aaKnown RBP26.55■■□□□ 1.84
RASSF4-209ENST00000483709 NESP48681 1621 aa26.48■■□□□ 1.83
RASSF4-209ENST00000483709 LAMC3Q9Y6N6 1575 aa26.4■■□□□ 1.82
RASSF4-209ENST00000483709 CCDC88BA6NC98 1476 aa26.38■■□□□ 1.81
RASSF4-209ENST00000483709 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
RASSF4-209ENST00000483709 ERCC6Q03468 1493 aa26.32■■□□□ 1.8
RASSF4-209ENST00000483709 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
RASSF4-209ENST00000483709 CFTRP13569 1480 aa26.23■■□□□ 1.79
RASSF4-209ENST00000483709 KIF21AQ7Z4S6 1674 aa26.16■■□□□ 1.78
RASSF4-209ENST00000483709 FANCD2Q9BXW9 1451 aa26.08■■□□□ 1.77
RASSF4-209ENST00000483709 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
RASSF4-209ENST00000483709 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
RASSF4-209ENST00000483709 THOC2Q8NI27 1593 aaKnown RBP26■■□□□ 1.75
RASSF4-209ENST00000483709 MRC2Q9UBG0 1479 aa25.96■■□□□ 1.75
RASSF4-209ENST00000483709 CUX2O14529 1486 aa25.92■■□□□ 1.74
RASSF4-209ENST00000483709 WDR62O43379 1518 aa25.84■■□□□ 1.73
RASSF4-209ENST00000483709 URB2Q14146 1524 aaKnown RBP25.8■■□□□ 1.72
RASSF4-209ENST00000483709 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
RASSF4-209ENST00000483709 ABCC8Q09428 1581 aa25.67■■□□□ 1.7
RASSF4-209ENST00000483709 DNMBPQ6XZF7 1577 aa25.66■■□□□ 1.7
RASSF4-209ENST00000483709 CUX1P39880 1505 aa25.55■■□□□ 1.68
RASSF4-209ENST00000483709 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
RASSF4-209ENST00000483709 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
RASSF4-209ENST00000483709 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
RASSF4-209ENST00000483709 FGD5Q6ZNL6 1462 aa25.45■■□□□ 1.66
RASSF4-209ENST00000483709 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
RASSF4-209ENST00000483709 SOGA1O94964 1423 aa25.39■■□□□ 1.66
RASSF4-209ENST00000483709 SYNJ1O43426 1573 aa25.39■■□□□ 1.65
RASSF4-209ENST00000483709 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
RASSF4-209ENST00000483709 TARBP1Q13395 1621 aaKnown RBP25.37■■□□□ 1.65
RASSF4-209ENST00000483709 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
RASSF4-209ENST00000483709 ZNF608Q9ULD9 1512 aaPredicted RBP25.36■■□□□ 1.65
RASSF4-209ENST00000483709 EIF4G3O43432 1585 aaKnown RBP25.26■■□□□ 1.63
RASSF4-209ENST00000483709 AQRO60306 1485 aaKnown RBP eCLIP25.25■■□□□ 1.63
RASSF4-209ENST00000483709 TDRD9Q8NDG6 1382 aaKnown RBP25.24■■□□□ 1.63
RASSF4-209ENST00000483709 WDR97A6NE52 1622 aa25.19■■□□□ 1.62
RASSF4-209ENST00000483709 ABCA10Q8WWZ4 1543 aa25.18■■□□□ 1.62
RASSF4-209ENST00000483709 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
RASSF4-209ENST00000483709 ABCA5Q8WWZ7 1642 aa25.06■■□□□ 1.6
RASSF4-209ENST00000483709 GRIN2BQ13224 1484 aa25.06■■□□□ 1.6
RASSF4-209ENST00000483709 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
RASSF4-209ENST00000483709 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
RASSF4-209ENST00000483709 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
RASSF4-209ENST00000483709 FBLN2P98095 1184 aa24.98■■□□□ 1.59
RASSF4-209ENST00000483709 DNAJC5Q9H3Z4 198 aa24.96■■□□□ 1.59
RASSF4-209ENST00000483709 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
RASSF4-209ENST00000483709 OSCARQ8IYS5 282 aa24.94■■□□□ 1.58
RASSF4-209ENST00000483709 CHD1O14646 1710 aa24.92■■□□□ 1.58
RASSF4-209ENST00000483709 KIF27Q86VH2 1401 aa24.92■■□□□ 1.58
RASSF4-209ENST00000483709 CHMP7Q8WUX9 453 aaPredicted RBP24.91■■□□□ 1.58
RASSF4-209ENST00000483709 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
RASSF4-209ENST00000483709 SYNJ2O15056 1496 aa24.87■■□□□ 1.57
RASSF4-209ENST00000483709 ADAMTS12P58397 1594 aa24.83■■□□□ 1.57
RASSF4-209ENST00000483709 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
RASSF4-209ENST00000483709 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
RASSF4-209ENST00000483709 IGF1RP08069 1367 aa24.79■■□□□ 1.56
RASSF4-209ENST00000483709 RUSC2Q8N2Y8 1516 aa24.77■■□□□ 1.56
RASSF4-209ENST00000483709 GRIN2AQ12879 1464 aa24.73■■□□□ 1.55
RASSF4-209ENST00000483709 CUL7Q14999 1698 aa24.7■■□□□ 1.54
RASSF4-209ENST00000483709 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
RASSF4-209ENST00000483709 CLASP1Q7Z460 1538 aa24.62■■□□□ 1.53
RASSF4-209ENST00000483709 CEP170Q5SW79 1584 aa24.6■■□□□ 1.53
RASSF4-209ENST00000483709 NUP160Q12769 1436 aa24.6■■□□□ 1.53
RASSF4-209ENST00000483709 FAM9AQ8IZU1 332 aaPredicted RBP24.57■■□□□ 1.52
RASSF4-209ENST00000483709 EEA1Q15075 1411 aa24.53■■□□□ 1.52
RASSF4-209ENST00000483709 CSRNP3Q8WYN3 585 aa24.53■■□□□ 1.52
RASSF4-209ENST00000483709 RAPGEF2Q9Y4G8 1499 aa24.52■■□□□ 1.52
RASSF4-209ENST00000483709 ARHGEF11O15085 1522 aa24.51■■□□□ 1.51
RASSF4-209ENST00000483709 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
RASSF4-209ENST00000483709 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms