Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 SPCS2P3-201ENST00000500401 656 ntBASIC11.25□□□□□ -0.61
LCA10Q71F78 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC11.25□□□□□ -0.61
LCA10Q71F78 AC087393.1-201ENST00000582896 145 ntBASIC11.25□□□□□ -0.61
LCA10Q71F78 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC11.25□□□□□ -0.61
LCA10Q71F78 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 RNF126P1-201ENST00000567452 1320 ntBASIC11.25□□□□□ -0.61
LCA10Q71F78 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
LCA10Q71F78 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC11.25□□□□□ -0.61
LCA10Q71F78 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LCA10Q71F78 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC11.24□□□□□ -0.61
LCA10Q71F78 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 AL022069.1-201ENST00000568025 1636 ntBASIC11.24□□□□□ -0.61
LCA10Q71F78 SMG8-203ENST00000578922 2178 ntBASIC11.24□□□□□ -0.61
LCA10Q71F78 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC11.24□□□□□ -0.61
LCA10Q71F78 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LCA10Q71F78 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LCA10Q71F78 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LCA10Q71F78 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LCA10Q71F78 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC11.24□□□□□ -0.61
LCA10Q71F78 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
LCA10Q71F78 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC11.24□□□□□ -0.61
LCA10Q71F78 MIR6765-201ENST00000614092 87 ntBASIC11.24□□□□□ -0.61
LCA10Q71F78 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
LCA10Q71F78 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.24□□□□□ -0.61
LCA10Q71F78 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC11.24□□□□□ -0.61
LCA10Q71F78 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LCA10Q71F78 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 FAM99A-202ENST00000538190 1989 ntBASIC11.23□□□□□ -0.61
LCA10Q71F78 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC11.23□□□□□ -0.61
LCA10Q71F78 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 FER1L4-210ENST00000615531 5998 ntBASIC11.23□□□□□ -0.61
LCA10Q71F78 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 IDNK-203ENST00000405990 629 ntTSL 2 BASIC11.23□□□□□ -0.61
LCA10Q71F78 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC11.23□□□□□ -0.61
LCA10Q71F78 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LCA10Q71F78 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC11.23□□□□□ -0.61
LCA10Q71F78 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC11.23□□□□□ -0.61
LCA10Q71F78 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LCA10Q71F78 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
LCA10Q71F78 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LCA10Q71F78 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LCA10Q71F78 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LCA10Q71F78 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LCA10Q71F78 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LCA10Q71F78 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LCA10Q71F78 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LCA10Q71F78 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LCA10Q71F78 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms