Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.91■□□□□ 0.94
CNTFP26441 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.91■□□□□ 0.94
CNTFP26441 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNTFP26441 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTFP26441 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CNTFP26441 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTFP26441 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNTFP26441 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
CNTFP26441 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CNTFP26441 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTFP26441 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CNTFP26441 AC131281.2-201ENST00000520478 145 ntBASIC20.91■□□□□ 0.94
CNTFP26441 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.91■□□□□ 0.94
CNTFP26441 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.91■□□□□ 0.94
CNTFP26441 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTFP26441 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.91■□□□□ 0.94
CNTFP26441 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CNTFP26441 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CNTFP26441 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTFP26441 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTFP26441 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTFP26441 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTFP26441 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTFP26441 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNTFP26441 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTFP26441 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNTFP26441 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTFP26441 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTFP26441 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTFP26441 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.9■□□□□ 0.94
CNTFP26441 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.9■□□□□ 0.94
CNTFP26441 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTFP26441 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.9■□□□□ 0.94
CNTFP26441 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CNTFP26441 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CNTFP26441 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTFP26441 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CNTFP26441 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CNTFP26441 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CNTFP26441 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNTFP26441 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTFP26441 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTFP26441 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTFP26441 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTFP26441 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.89■□□□□ 0.93
CNTFP26441 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNTFP26441 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CNTFP26441 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTFP26441 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTFP26441 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTFP26441 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
CNTFP26441 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTFP26441 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTFP26441 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTFP26441 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTFP26441 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTFP26441 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTFP26441 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTFP26441 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTFP26441 AC055733.4-201ENST00000638462 1354 ntBASIC20.88■□□□□ 0.93
CNTFP26441 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTFP26441 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CNTFP26441 AC073314.1-201ENST00000568729 2216 ntBASIC20.88■□□□□ 0.93
CNTFP26441 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTFP26441 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTFP26441 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTFP26441 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.88■□□□□ 0.93
CNTFP26441 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTFP26441 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTFP26441 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTFP26441 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTFP26441 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.88■□□□□ 0.93
CNTFP26441 AC233992.3-201ENST00000607491 485 ntBASIC20.88■□□□□ 0.93
CNTFP26441 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTFP26441 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CNTFP26441 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTFP26441 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CNTFP26441 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTFP26441 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTFP26441 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CNTFP26441 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTFP26441 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTFP26441 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTFP26441 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CNTFP26441 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTFP26441 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CNTFP26441 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTFP26441 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.87■□□□□ 0.93
CNTFP26441 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTFP26441 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CNTFP26441 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTFP26441 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
CNTFP26441 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CNTFP26441 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTFP26441 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTFP26441 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTFP26441 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTFP26441 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTFP26441 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTFP26441 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms