Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 DUX4L28-201ENST00000623687 678 ntBASIC26.16■■□□□ 1.78
PCDHB11Q9Y5F2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHB11Q9Y5F2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHB11Q9Y5F2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHB11Q9Y5F2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.13■■□□□ 1.77
PCDHB11Q9Y5F2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.13■■□□□ 1.77
PCDHB11Q9Y5F2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHB11Q9Y5F2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB11Q9Y5F2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHB11Q9Y5F2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHB11Q9Y5F2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.1■■□□□ 1.77
PCDHB11Q9Y5F2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHB11Q9Y5F2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDHB11Q9Y5F2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB11Q9Y5F2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHB11Q9Y5F2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHB11Q9Y5F2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
PCDHB11Q9Y5F2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
PCDHB11Q9Y5F2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.05■■□□□ 1.76
PCDHB11Q9Y5F2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHB11Q9Y5F2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB11Q9Y5F2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB11Q9Y5F2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHB11Q9Y5F2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHB11Q9Y5F2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHB11Q9Y5F2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
PCDHB11Q9Y5F2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHB11Q9Y5F2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26■■□□□ 1.75
PCDHB11Q9Y5F2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHB11Q9Y5F2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
PCDHB11Q9Y5F2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDHB11Q9Y5F2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHB11Q9Y5F2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHB11Q9Y5F2 HLA-V-202ENST00000446817 847 ntBASIC25.98■■□□□ 1.75
PCDHB11Q9Y5F2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHB11Q9Y5F2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.97■■□□□ 1.75
PCDHB11Q9Y5F2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
PCDHB11Q9Y5F2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.96■■□□□ 1.75
PCDHB11Q9Y5F2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.96■■□□□ 1.75
PCDHB11Q9Y5F2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
PCDHB11Q9Y5F2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
PCDHB11Q9Y5F2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHB11Q9Y5F2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.95■■□□□ 1.74
PCDHB11Q9Y5F2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHB11Q9Y5F2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHB11Q9Y5F2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.93■■□□□ 1.74
PCDHB11Q9Y5F2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHB11Q9Y5F2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHB11Q9Y5F2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHB11Q9Y5F2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHB11Q9Y5F2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.91■■□□□ 1.74
PCDHB11Q9Y5F2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.91■■□□□ 1.74
PCDHB11Q9Y5F2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.9■■□□□ 1.74
PCDHB11Q9Y5F2 AL161658.1-201ENST00000623641 1967 ntBASIC25.89■■□□□ 1.74
PCDHB11Q9Y5F2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHB11Q9Y5F2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.89■■□□□ 1.74
PCDHB11Q9Y5F2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHB11Q9Y5F2 ZNRF2P2-203ENST00000454624 420 ntBASIC25.87■■□□□ 1.73
PCDHB11Q9Y5F2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.87■■□□□ 1.73
PCDHB11Q9Y5F2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHB11Q9Y5F2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
PCDHB11Q9Y5F2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHB11Q9Y5F2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.85■■□□□ 1.73
PCDHB11Q9Y5F2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHB11Q9Y5F2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHB11Q9Y5F2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.85■■□□□ 1.73
PCDHB11Q9Y5F2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHB11Q9Y5F2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHB11Q9Y5F2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
PCDHB11Q9Y5F2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB11Q9Y5F2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
PCDHB11Q9Y5F2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
PCDHB11Q9Y5F2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHB11Q9Y5F2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB11Q9Y5F2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB11Q9Y5F2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB11Q9Y5F2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB11Q9Y5F2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHB11Q9Y5F2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHB11Q9Y5F2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHB11Q9Y5F2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHB11Q9Y5F2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.8■■□□□ 1.72
PCDHB11Q9Y5F2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHB11Q9Y5F2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHB11Q9Y5F2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
PCDHB11Q9Y5F2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHB11Q9Y5F2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHB11Q9Y5F2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHB11Q9Y5F2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB11Q9Y5F2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB11Q9Y5F2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB11Q9Y5F2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB11Q9Y5F2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB11Q9Y5F2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB11Q9Y5F2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB11Q9Y5F2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHB11Q9Y5F2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHB11Q9Y5F2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.76■■□□□ 1.71
PCDHB11Q9Y5F2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHB11Q9Y5F2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms