Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
UBQLN1Q9UMX0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.84■■■□□ 2.21
UBQLN1Q9UMX0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
UBQLN1Q9UMX0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.82■■■□□ 2.2
UBQLN1Q9UMX0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
UBQLN1Q9UMX0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
UBQLN1Q9UMX0 AL161658.1-201ENST00000623641 1967 ntBASIC28.81■■■□□ 2.2
UBQLN1Q9UMX0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
UBQLN1Q9UMX0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.78■■■□□ 2.2
UBQLN1Q9UMX0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
UBQLN1Q9UMX0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
UBQLN1Q9UMX0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
UBQLN1Q9UMX0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
UBQLN1Q9UMX0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
UBQLN1Q9UMX0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
UBQLN1Q9UMX0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
UBQLN1Q9UMX0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
UBQLN1Q9UMX0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.77■■■□□ 2.2
UBQLN1Q9UMX0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.76■■■□□ 2.19
UBQLN1Q9UMX0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.76■■■□□ 2.19
UBQLN1Q9UMX0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
UBQLN1Q9UMX0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
UBQLN1Q9UMX0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
UBQLN1Q9UMX0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
UBQLN1Q9UMX0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
UBQLN1Q9UMX0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
UBQLN1Q9UMX0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
UBQLN1Q9UMX0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
UBQLN1Q9UMX0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.74■■■□□ 2.19
UBQLN1Q9UMX0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.74■■■□□ 2.19
UBQLN1Q9UMX0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
UBQLN1Q9UMX0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
UBQLN1Q9UMX0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
UBQLN1Q9UMX0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.73■■■□□ 2.19
UBQLN1Q9UMX0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
UBQLN1Q9UMX0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.7■■■□□ 2.19
UBQLN1Q9UMX0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.7■■■□□ 2.19
UBQLN1Q9UMX0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
UBQLN1Q9UMX0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.7■■■□□ 2.18
UBQLN1Q9UMX0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
UBQLN1Q9UMX0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
UBQLN1Q9UMX0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
UBQLN1Q9UMX0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.69■■■□□ 2.18
UBQLN1Q9UMX0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
UBQLN1Q9UMX0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
UBQLN1Q9UMX0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
UBQLN1Q9UMX0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.67■■■□□ 2.18
UBQLN1Q9UMX0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
UBQLN1Q9UMX0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
UBQLN1Q9UMX0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
UBQLN1Q9UMX0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
UBQLN1Q9UMX0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
UBQLN1Q9UMX0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
UBQLN1Q9UMX0 AC108673.1-201ENST00000510422 1159 ntBASIC28.63■■■□□ 2.17
UBQLN1Q9UMX0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.63■■■□□ 2.17
UBQLN1Q9UMX0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
UBQLN1Q9UMX0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
UBQLN1Q9UMX0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
UBQLN1Q9UMX0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.61■■■□□ 2.17
UBQLN1Q9UMX0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
UBQLN1Q9UMX0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
UBQLN1Q9UMX0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.6■■■□□ 2.17
UBQLN1Q9UMX0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
UBQLN1Q9UMX0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.59■■■□□ 2.17
UBQLN1Q9UMX0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.59■■■□□ 2.17
UBQLN1Q9UMX0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
UBQLN1Q9UMX0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
UBQLN1Q9UMX0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.16
UBQLN1Q9UMX0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.58■■■□□ 2.16
UBQLN1Q9UMX0 MIR6090-201ENST00000622481 60 ntBASIC28.57■■■□□ 2.16
UBQLN1Q9UMX0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
UBQLN1Q9UMX0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
UBQLN1Q9UMX0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
UBQLN1Q9UMX0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
UBQLN1Q9UMX0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
UBQLN1Q9UMX0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
UBQLN1Q9UMX0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
UBQLN1Q9UMX0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
UBQLN1Q9UMX0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
UBQLN1Q9UMX0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.53■■■□□ 2.16
UBQLN1Q9UMX0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
UBQLN1Q9UMX0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.53■■■□□ 2.16
UBQLN1Q9UMX0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
UBQLN1Q9UMX0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
UBQLN1Q9UMX0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
UBQLN1Q9UMX0 ABHD17AP4-201ENST00000411545 909 ntBASIC28.52■■■□□ 2.16
UBQLN1Q9UMX0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.52■■■□□ 2.16
UBQLN1Q9UMX0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.52■■■□□ 2.16
UBQLN1Q9UMX0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.52■■■□□ 2.16
UBQLN1Q9UMX0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.52■■■□□ 2.16
UBQLN1Q9UMX0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
UBQLN1Q9UMX0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.5■■■□□ 2.15
UBQLN1Q9UMX0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
UBQLN1Q9UMX0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
UBQLN1Q9UMX0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.5■■■□□ 2.15
UBQLN1Q9UMX0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.49■■■□□ 2.15
UBQLN1Q9UMX0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
UBQLN1Q9UMX0 DUX4L29-201ENST00000425409 679 ntBASIC28.48■■■□□ 2.15
UBQLN1Q9UMX0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.48■■■□□ 2.15
UBQLN1Q9UMX0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.47■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms