Protein–RNA interactions for Protein: Q9H4Q3

PRDM13, PR domain zinc finger protein 13, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13Q9H4Q3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.83■■□□□ 1.09
PRDM13Q9H4Q3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PRDM13Q9H4Q3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.83■■□□□ 1.09
PRDM13Q9H4Q3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
PRDM13Q9H4Q3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PRDM13Q9H4Q3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRDM13Q9H4Q3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRDM13Q9H4Q3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRDM13Q9H4Q3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRDM13Q9H4Q3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRDM13Q9H4Q3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRDM13Q9H4Q3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRDM13Q9H4Q3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRDM13Q9H4Q3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRDM13Q9H4Q3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRDM13Q9H4Q3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRDM13Q9H4Q3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRDM13Q9H4Q3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.79■■□□□ 1.08
PRDM13Q9H4Q3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
PRDM13Q9H4Q3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRDM13Q9H4Q3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRDM13Q9H4Q3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.77■■□□□ 1.08
PRDM13Q9H4Q3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.77■■□□□ 1.08
PRDM13Q9H4Q3 AC135731.1-201ENST00000569415 2548 ntBASIC21.77■■□□□ 1.08
PRDM13Q9H4Q3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRDM13Q9H4Q3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRDM13Q9H4Q3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM13Q9H4Q3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM13Q9H4Q3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRDM13Q9H4Q3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PRDM13Q9H4Q3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRDM13Q9H4Q3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.75■■□□□ 1.07
PRDM13Q9H4Q3 MIR7108-201ENST00000614319 87 ntBASIC21.75■■□□□ 1.07
PRDM13Q9H4Q3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM13Q9H4Q3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.74■■□□□ 1.07
PRDM13Q9H4Q3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PRDM13Q9H4Q3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM13Q9H4Q3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRDM13Q9H4Q3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM13Q9H4Q3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PRDM13Q9H4Q3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
PRDM13Q9H4Q3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PRDM13Q9H4Q3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRDM13Q9H4Q3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM13Q9H4Q3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRDM13Q9H4Q3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRDM13Q9H4Q3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRDM13Q9H4Q3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRDM13Q9H4Q3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRDM13Q9H4Q3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.7■■□□□ 1.06
PRDM13Q9H4Q3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRDM13Q9H4Q3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRDM13Q9H4Q3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRDM13Q9H4Q3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRDM13Q9H4Q3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRDM13Q9H4Q3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRDM13Q9H4Q3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRDM13Q9H4Q3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
PRDM13Q9H4Q3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.68■■□□□ 1.06
PRDM13Q9H4Q3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.68■■□□□ 1.06
PRDM13Q9H4Q3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.68■■□□□ 1.06
PRDM13Q9H4Q3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRDM13Q9H4Q3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRDM13Q9H4Q3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRDM13Q9H4Q3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRDM13Q9H4Q3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.66■■□□□ 1.06
PRDM13Q9H4Q3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRDM13Q9H4Q3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.65■■□□□ 1.06
PRDM13Q9H4Q3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRDM13Q9H4Q3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRDM13Q9H4Q3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRDM13Q9H4Q3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PRDM13Q9H4Q3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.64■■□□□ 1.05
PRDM13Q9H4Q3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRDM13Q9H4Q3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.63■■□□□ 1.05
PRDM13Q9H4Q3 ZNRF2P2-203ENST00000454624 420 ntBASIC21.63■■□□□ 1.05
PRDM13Q9H4Q3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.63■■□□□ 1.05
PRDM13Q9H4Q3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.63■■□□□ 1.05
PRDM13Q9H4Q3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRDM13Q9H4Q3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.62■■□□□ 1.05
PRDM13Q9H4Q3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.62■■□□□ 1.05
PRDM13Q9H4Q3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRDM13Q9H4Q3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.61■■□□□ 1.05
PRDM13Q9H4Q3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.61■■□□□ 1.05
PRDM13Q9H4Q3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRDM13Q9H4Q3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRDM13Q9H4Q3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRDM13Q9H4Q3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.6■■□□□ 1.05
PRDM13Q9H4Q3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.6■■□□□ 1.05
PRDM13Q9H4Q3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.6■■□□□ 1.05
PRDM13Q9H4Q3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRDM13Q9H4Q3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRDM13Q9H4Q3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRDM13Q9H4Q3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRDM13Q9H4Q3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.59■■□□□ 1.05
PRDM13Q9H4Q3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRDM13Q9H4Q3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PRDM13Q9H4Q3 DUX4L29-201ENST00000425409 679 ntBASIC21.58■■□□□ 1.05
PRDM13Q9H4Q3 AC108673.1-201ENST00000510422 1159 ntBASIC21.57■■□□□ 1.04
PRDM13Q9H4Q3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms