Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
R3HDM4Q96D70 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
R3HDM4Q96D70 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
R3HDM4Q96D70 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
R3HDM4Q96D70 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
R3HDM4Q96D70 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
R3HDM4Q96D70 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
R3HDM4Q96D70 SUZ12P1-203ENST00000578195 985 ntBASIC21.84■■□□□ 1.09
R3HDM4Q96D70 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.83■■□□□ 1.09
R3HDM4Q96D70 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
R3HDM4Q96D70 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
R3HDM4Q96D70 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
R3HDM4Q96D70 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.08
R3HDM4Q96D70 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
R3HDM4Q96D70 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
R3HDM4Q96D70 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HDM4Q96D70 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
R3HDM4Q96D70 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
R3HDM4Q96D70 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3HDM4Q96D70 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3HDM4Q96D70 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.79■■□□□ 1.08
R3HDM4Q96D70 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3HDM4Q96D70 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
R3HDM4Q96D70 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3HDM4Q96D70 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.78■■□□□ 1.08
R3HDM4Q96D70 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
R3HDM4Q96D70 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
R3HDM4Q96D70 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
R3HDM4Q96D70 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3HDM4Q96D70 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3HDM4Q96D70 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
R3HDM4Q96D70 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3HDM4Q96D70 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
R3HDM4Q96D70 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
R3HDM4Q96D70 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
R3HDM4Q96D70 RPS2P35-201ENST00000443417 897 ntBASIC21.75■■□□□ 1.07
R3HDM4Q96D70 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
R3HDM4Q96D70 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
R3HDM4Q96D70 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
R3HDM4Q96D70 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.75■■□□□ 1.07
R3HDM4Q96D70 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
R3HDM4Q96D70 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
R3HDM4Q96D70 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
R3HDM4Q96D70 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
R3HDM4Q96D70 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
R3HDM4Q96D70 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HDM4Q96D70 ST7-AS1-201ENST00000456775 1889 ntBASIC21.72■■□□□ 1.07
R3HDM4Q96D70 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HDM4Q96D70 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
R3HDM4Q96D70 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
R3HDM4Q96D70 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HDM4Q96D70 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
R3HDM4Q96D70 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
R3HDM4Q96D70 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
R3HDM4Q96D70 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
R3HDM4Q96D70 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
R3HDM4Q96D70 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
R3HDM4Q96D70 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.68■■□□□ 1.06
R3HDM4Q96D70 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
R3HDM4Q96D70 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
R3HDM4Q96D70 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
R3HDM4Q96D70 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HDM4Q96D70 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.66■■□□□ 1.06
R3HDM4Q96D70 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HDM4Q96D70 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HDM4Q96D70 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
R3HDM4Q96D70 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3HDM4Q96D70 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3HDM4Q96D70 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3HDM4Q96D70 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.63■■□□□ 1.05
R3HDM4Q96D70 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3HDM4Q96D70 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
R3HDM4Q96D70 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
R3HDM4Q96D70 CAHM-201ENST00000604200 896 ntBASIC21.62■■□□□ 1.05
R3HDM4Q96D70 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
R3HDM4Q96D70 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
R3HDM4Q96D70 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HDM4Q96D70 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
R3HDM4Q96D70 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.6■■□□□ 1.05
R3HDM4Q96D70 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
R3HDM4Q96D70 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HDM4Q96D70 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
R3HDM4Q96D70 AL135925.1-201ENST00000605920 1701 ntBASIC21.58■■□□□ 1.05
R3HDM4Q96D70 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
R3HDM4Q96D70 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
R3HDM4Q96D70 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HDM4Q96D70 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.57■■□□□ 1.04
R3HDM4Q96D70 AL133380.1-201ENST00000506013 324 ntBASIC21.57■■□□□ 1.04
R3HDM4Q96D70 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HDM4Q96D70 AL391121.1-201ENST00000607967 1349 ntBASIC21.56■■□□□ 1.04
R3HDM4Q96D70 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HDM4Q96D70 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
R3HDM4Q96D70 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3HDM4Q96D70 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
R3HDM4Q96D70 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HDM4Q96D70 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HDM4Q96D70 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
R3HDM4Q96D70 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HDM4Q96D70 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
R3HDM4Q96D70 AP006261.1-201ENST00000584783 668 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms