Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
HMGCLL1Q8TB92 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.26■■□□□ 1.79
HMGCLL1Q8TB92 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HMGCLL1Q8TB92 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.25■■□□□ 1.79
HMGCLL1Q8TB92 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
HMGCLL1Q8TB92 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.24■■□□□ 1.79
HMGCLL1Q8TB92 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HMGCLL1Q8TB92 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
HMGCLL1Q8TB92 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.23■■□□□ 1.79
HMGCLL1Q8TB92 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
HMGCLL1Q8TB92 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.21■■□□□ 1.79
HMGCLL1Q8TB92 SUZ12P1-203ENST00000578195 985 ntBASIC26.21■■□□□ 1.79
HMGCLL1Q8TB92 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HMGCLL1Q8TB92 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
HMGCLL1Q8TB92 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
HMGCLL1Q8TB92 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HMGCLL1Q8TB92 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
HMGCLL1Q8TB92 AC139426.1-201ENST00000568218 2529 ntBASIC26.2■■□□□ 1.78
HMGCLL1Q8TB92 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HMGCLL1Q8TB92 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
HMGCLL1Q8TB92 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.19■■□□□ 1.78
HMGCLL1Q8TB92 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
HMGCLL1Q8TB92 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.18■■□□□ 1.78
HMGCLL1Q8TB92 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
HMGCLL1Q8TB92 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.16■■□□□ 1.78
HMGCLL1Q8TB92 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
HMGCLL1Q8TB92 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
HMGCLL1Q8TB92 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
HMGCLL1Q8TB92 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
HMGCLL1Q8TB92 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
HMGCLL1Q8TB92 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
HMGCLL1Q8TB92 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
HMGCLL1Q8TB92 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
HMGCLL1Q8TB92 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
HMGCLL1Q8TB92 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
HMGCLL1Q8TB92 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
HMGCLL1Q8TB92 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
HMGCLL1Q8TB92 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.76
HMGCLL1Q8TB92 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.08■■□□□ 1.76
HMGCLL1Q8TB92 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
HMGCLL1Q8TB92 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.07■■□□□ 1.76
HMGCLL1Q8TB92 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
HMGCLL1Q8TB92 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HMGCLL1Q8TB92 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HMGCLL1Q8TB92 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
HMGCLL1Q8TB92 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
HMGCLL1Q8TB92 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
HMGCLL1Q8TB92 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HMGCLL1Q8TB92 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
HMGCLL1Q8TB92 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.02■■□□□ 1.76
HMGCLL1Q8TB92 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
HMGCLL1Q8TB92 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCLL1Q8TB92 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HMGCLL1Q8TB92 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.01■■□□□ 1.75
HMGCLL1Q8TB92 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
HMGCLL1Q8TB92 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HMGCLL1Q8TB92 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26■■□□□ 1.75
HMGCLL1Q8TB92 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HMGCLL1Q8TB92 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
HMGCLL1Q8TB92 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.99■■□□□ 1.75
HMGCLL1Q8TB92 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
HMGCLL1Q8TB92 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
HMGCLL1Q8TB92 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
HMGCLL1Q8TB92 ST7-AS1-201ENST00000456775 1889 ntBASIC25.98■■□□□ 1.75
HMGCLL1Q8TB92 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HMGCLL1Q8TB92 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HMGCLL1Q8TB92 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HMGCLL1Q8TB92 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.96■■□□□ 1.75
HMGCLL1Q8TB92 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.96■■□□□ 1.75
HMGCLL1Q8TB92 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HMGCLL1Q8TB92 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
HMGCLL1Q8TB92 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
HMGCLL1Q8TB92 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
HMGCLL1Q8TB92 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
HMGCLL1Q8TB92 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.94■■□□□ 1.74
HMGCLL1Q8TB92 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.94■■□□□ 1.74
HMGCLL1Q8TB92 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.93■■□□□ 1.74
HMGCLL1Q8TB92 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
HMGCLL1Q8TB92 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
HMGCLL1Q8TB92 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HMGCLL1Q8TB92 AL161658.1-201ENST00000623641 1967 ntBASIC25.91■■□□□ 1.74
HMGCLL1Q8TB92 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.91■■□□□ 1.74
HMGCLL1Q8TB92 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
HMGCLL1Q8TB92 MIR762-201ENST00000390236 83 ntBASIC25.9■■□□□ 1.74
HMGCLL1Q8TB92 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
HMGCLL1Q8TB92 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.9■■□□□ 1.74
HMGCLL1Q8TB92 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
HMGCLL1Q8TB92 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
HMGCLL1Q8TB92 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
HMGCLL1Q8TB92 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
HMGCLL1Q8TB92 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
HMGCLL1Q8TB92 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HMGCLL1Q8TB92 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
HMGCLL1Q8TB92 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HMGCLL1Q8TB92 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HMGCLL1Q8TB92 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HMGCLL1Q8TB92 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HMGCLL1Q8TB92 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
HMGCLL1Q8TB92 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.86■■□□□ 1.73
HMGCLL1Q8TB92 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms