Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 WASH5P-204ENST00000632292 975 ntBASIC30.31■■■□□ 2.44
RETREG2Q8NC44 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RETREG2Q8NC44 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RETREG2Q8NC44 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
RETREG2Q8NC44 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
RETREG2Q8NC44 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.28■■■□□ 2.44
RETREG2Q8NC44 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RETREG2Q8NC44 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RETREG2Q8NC44 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.27■■■□□ 2.44
RETREG2Q8NC44 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.26■■■□□ 2.43
RETREG2Q8NC44 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RETREG2Q8NC44 ZNRF2P2-203ENST00000454624 420 ntBASIC30.25■■■□□ 2.43
RETREG2Q8NC44 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.24■■■□□ 2.43
RETREG2Q8NC44 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.23■■■□□ 2.43
RETREG2Q8NC44 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RETREG2Q8NC44 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.21■■■□□ 2.43
RETREG2Q8NC44 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.21■■■□□ 2.43
RETREG2Q8NC44 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RETREG2Q8NC44 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.2■■■□□ 2.43
RETREG2Q8NC44 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RETREG2Q8NC44 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.19■■■□□ 2.42
RETREG2Q8NC44 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RETREG2Q8NC44 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RETREG2Q8NC44 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RETREG2Q8NC44 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RETREG2Q8NC44 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RETREG2Q8NC44 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RETREG2Q8NC44 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RETREG2Q8NC44 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.17■■■□□ 2.42
RETREG2Q8NC44 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RETREG2Q8NC44 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RETREG2Q8NC44 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RETREG2Q8NC44 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RETREG2Q8NC44 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.41
RETREG2Q8NC44 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
RETREG2Q8NC44 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.12■■■□□ 2.41
RETREG2Q8NC44 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.12■■■□□ 2.41
RETREG2Q8NC44 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RETREG2Q8NC44 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
RETREG2Q8NC44 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RETREG2Q8NC44 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.11■■■□□ 2.41
RETREG2Q8NC44 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.11■■■□□ 2.41
RETREG2Q8NC44 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RETREG2Q8NC44 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RETREG2Q8NC44 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
RETREG2Q8NC44 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RETREG2Q8NC44 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
RETREG2Q8NC44 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RETREG2Q8NC44 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RETREG2Q8NC44 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RETREG2Q8NC44 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RETREG2Q8NC44 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.07■■■□□ 2.4
RETREG2Q8NC44 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RETREG2Q8NC44 AC120057.4-201ENST00000624722 1615 ntBASIC30.06■■■□□ 2.4
RETREG2Q8NC44 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
RETREG2Q8NC44 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
RETREG2Q8NC44 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.05■■■□□ 2.4
RETREG2Q8NC44 DUX4L29-201ENST00000425409 679 ntBASIC30.05■■■□□ 2.4
RETREG2Q8NC44 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.05■■■□□ 2.4
RETREG2Q8NC44 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.03■■■□□ 2.4
RETREG2Q8NC44 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RETREG2Q8NC44 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.03■■■□□ 2.4
RETREG2Q8NC44 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RETREG2Q8NC44 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RETREG2Q8NC44 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.02■■■□□ 2.4
RETREG2Q8NC44 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RETREG2Q8NC44 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RETREG2Q8NC44 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
RETREG2Q8NC44 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RETREG2Q8NC44 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RETREG2Q8NC44 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RETREG2Q8NC44 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.96■■■□□ 2.39
RETREG2Q8NC44 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
RETREG2Q8NC44 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
RETREG2Q8NC44 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RETREG2Q8NC44 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RETREG2Q8NC44 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RETREG2Q8NC44 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RETREG2Q8NC44 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
RETREG2Q8NC44 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.92■■■□□ 2.38
RETREG2Q8NC44 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RETREG2Q8NC44 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
RETREG2Q8NC44 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
RETREG2Q8NC44 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RETREG2Q8NC44 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
RETREG2Q8NC44 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RETREG2Q8NC44 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.89■■■□□ 2.38
RETREG2Q8NC44 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.88■■■□□ 2.37
RETREG2Q8NC44 AC021231.2-201ENST00000594613 730 ntBASIC29.87■■■□□ 2.37
RETREG2Q8NC44 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
RETREG2Q8NC44 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RETREG2Q8NC44 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.84■■■□□ 2.37
RETREG2Q8NC44 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
RETREG2Q8NC44 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.83■■■□□ 2.37
RETREG2Q8NC44 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RETREG2Q8NC44 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.82■■■□□ 2.36
RETREG2Q8NC44 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RETREG2Q8NC44 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RETREG2Q8NC44 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
RETREG2Q8NC44 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.81■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms