Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.14■■□□□ 1.78
EFCAB3Q8N7B9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
EFCAB3Q8N7B9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
EFCAB3Q8N7B9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
EFCAB3Q8N7B9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
EFCAB3Q8N7B9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
EFCAB3Q8N7B9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
EFCAB3Q8N7B9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.1■■□□□ 1.77
EFCAB3Q8N7B9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.09■■□□□ 1.77
EFCAB3Q8N7B9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.09■■□□□ 1.77
EFCAB3Q8N7B9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
EFCAB3Q8N7B9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
EFCAB3Q8N7B9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
EFCAB3Q8N7B9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
EFCAB3Q8N7B9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
EFCAB3Q8N7B9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
EFCAB3Q8N7B9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
EFCAB3Q8N7B9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.07■■□□□ 1.76
EFCAB3Q8N7B9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.07■■□□□ 1.76
EFCAB3Q8N7B9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
EFCAB3Q8N7B9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
EFCAB3Q8N7B9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
EFCAB3Q8N7B9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
EFCAB3Q8N7B9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
EFCAB3Q8N7B9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
EFCAB3Q8N7B9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
EFCAB3Q8N7B9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
EFCAB3Q8N7B9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
EFCAB3Q8N7B9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
EFCAB3Q8N7B9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
EFCAB3Q8N7B9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.01■■□□□ 1.75
EFCAB3Q8N7B9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
EFCAB3Q8N7B9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
EFCAB3Q8N7B9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
EFCAB3Q8N7B9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
EFCAB3Q8N7B9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26■■□□□ 1.75
EFCAB3Q8N7B9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
EFCAB3Q8N7B9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
EFCAB3Q8N7B9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
EFCAB3Q8N7B9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
EFCAB3Q8N7B9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
EFCAB3Q8N7B9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
EFCAB3Q8N7B9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
EFCAB3Q8N7B9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
EFCAB3Q8N7B9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
EFCAB3Q8N7B9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
EFCAB3Q8N7B9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
EFCAB3Q8N7B9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
EFCAB3Q8N7B9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
EFCAB3Q8N7B9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.93■■□□□ 1.74
EFCAB3Q8N7B9 AL161658.1-201ENST00000623641 1967 ntBASIC25.91■■□□□ 1.74
EFCAB3Q8N7B9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
EFCAB3Q8N7B9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
EFCAB3Q8N7B9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
EFCAB3Q8N7B9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
EFCAB3Q8N7B9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
EFCAB3Q8N7B9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
EFCAB3Q8N7B9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.87■■□□□ 1.73
EFCAB3Q8N7B9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
EFCAB3Q8N7B9 AP006261.1-201ENST00000584783 668 ntBASIC25.87■■□□□ 1.73
EFCAB3Q8N7B9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
EFCAB3Q8N7B9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
EFCAB3Q8N7B9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
EFCAB3Q8N7B9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
EFCAB3Q8N7B9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
EFCAB3Q8N7B9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
EFCAB3Q8N7B9 AL162393.1-201ENST00000437852 946 ntBASIC25.84■■□□□ 1.73
EFCAB3Q8N7B9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
EFCAB3Q8N7B9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
EFCAB3Q8N7B9 ST7-AS1-201ENST00000456775 1889 ntBASIC25.83■■□□□ 1.73
EFCAB3Q8N7B9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
EFCAB3Q8N7B9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
EFCAB3Q8N7B9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.81■■□□□ 1.72
EFCAB3Q8N7B9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
EFCAB3Q8N7B9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
EFCAB3Q8N7B9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
EFCAB3Q8N7B9 AL133380.1-201ENST00000506013 324 ntBASIC25.8■■□□□ 1.72
EFCAB3Q8N7B9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
EFCAB3Q8N7B9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.8■■□□□ 1.72
EFCAB3Q8N7B9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
EFCAB3Q8N7B9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.78■■□□□ 1.72
EFCAB3Q8N7B9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
EFCAB3Q8N7B9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.78■■□□□ 1.72
EFCAB3Q8N7B9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
EFCAB3Q8N7B9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
EFCAB3Q8N7B9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
EFCAB3Q8N7B9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.76■■□□□ 1.71
EFCAB3Q8N7B9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
EFCAB3Q8N7B9 CAHM-201ENST00000604200 896 ntBASIC25.75■■□□□ 1.71
EFCAB3Q8N7B9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
EFCAB3Q8N7B9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.74■■□□□ 1.71
EFCAB3Q8N7B9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.74■■□□□ 1.71
EFCAB3Q8N7B9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.73■■□□□ 1.71
EFCAB3Q8N7B9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
EFCAB3Q8N7B9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
EFCAB3Q8N7B9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
EFCAB3Q8N7B9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
EFCAB3Q8N7B9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
EFCAB3Q8N7B9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
EFCAB3Q8N7B9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms