Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.65■■□□□ 1.06
SAA4P35542 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SAA4P35542 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SAA4P35542 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SAA4P35542 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SAA4P35542 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SAA4P35542 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SAA4P35542 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SAA4P35542 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SAA4P35542 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SAA4P35542 AL161658.1-201ENST00000623641 1967 ntBASIC21.63■■□□□ 1.05
SAA4P35542 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
SAA4P35542 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SAA4P35542 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SAA4P35542 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SAA4P35542 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SAA4P35542 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.62■■□□□ 1.05
SAA4P35542 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.61■■□□□ 1.05
SAA4P35542 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.61■■□□□ 1.05
SAA4P35542 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SAA4P35542 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.6■■□□□ 1.05
SAA4P35542 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SAA4P35542 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.6■■□□□ 1.05
SAA4P35542 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
SAA4P35542 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SAA4P35542 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SAA4P35542 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SAA4P35542 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SAA4P35542 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SAA4P35542 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.57■■□□□ 1.04
SAA4P35542 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SAA4P35542 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.57■■□□□ 1.04
SAA4P35542 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SAA4P35542 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.56■■□□□ 1.04
SAA4P35542 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SAA4P35542 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SAA4P35542 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SAA4P35542 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SAA4P35542 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SAA4P35542 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SAA4P35542 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SAA4P35542 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SAA4P35542 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.54■■□□□ 1.04
SAA4P35542 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SAA4P35542 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SAA4P35542 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SAA4P35542 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SAA4P35542 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.52■■□□□ 1.04
SAA4P35542 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SAA4P35542 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SAA4P35542 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SAA4P35542 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.5■■□□□ 1.03
SAA4P35542 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SAA4P35542 AC108673.1-201ENST00000510422 1159 ntBASIC21.5■■□□□ 1.03
SAA4P35542 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SAA4P35542 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SAA4P35542 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SAA4P35542 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SAA4P35542 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SAA4P35542 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SAA4P35542 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.48■■□□□ 1.03
SAA4P35542 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.48■■□□□ 1.03
SAA4P35542 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SAA4P35542 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.46■■□□□ 1.03
SAA4P35542 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.46■■□□□ 1.03
SAA4P35542 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SAA4P35542 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.45■■□□□ 1.02
SAA4P35542 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.45■■□□□ 1.02
SAA4P35542 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.45■■□□□ 1.02
SAA4P35542 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.45■■□□□ 1.02
SAA4P35542 MIR6090-201ENST00000622481 60 ntBASIC21.45■■□□□ 1.02
SAA4P35542 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
SAA4P35542 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SAA4P35542 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SAA4P35542 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
SAA4P35542 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SAA4P35542 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SAA4P35542 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SAA4P35542 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SAA4P35542 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SAA4P35542 ABHD17AP4-201ENST00000411545 909 ntBASIC21.43■■□□□ 1.02
SAA4P35542 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SAA4P35542 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SAA4P35542 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SAA4P35542 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SAA4P35542 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SAA4P35542 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SAA4P35542 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SAA4P35542 DUX4L29-201ENST00000425409 679 ntBASIC21.41■■□□□ 1.02
SAA4P35542 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.41■■□□□ 1.02
SAA4P35542 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.4■■□□□ 1.02
SAA4P35542 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SAA4P35542 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SAA4P35542 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SAA4P35542 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SAA4P35542 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SAA4P35542 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
SAA4P35542 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.39■■□□□ 1.01
SAA4P35542 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.38■■□□□ 1.01
SAA4P35542 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms