Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.15■□□□□ 0.98
IFNA1P01562 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
IFNA1P01562 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
IFNA1P01562 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.14■□□□□ 0.98
IFNA1P01562 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
IFNA1P01562 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
IFNA1P01562 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.14■□□□□ 0.97
IFNA1P01562 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
IFNA1P01562 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
IFNA1P01562 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IFNA1P01562 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
IFNA1P01562 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IFNA1P01562 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IFNA1P01562 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IFNA1P01562 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IFNA1P01562 ST7-AS1-201ENST00000456775 1889 ntBASIC21.11■□□□□ 0.97
IFNA1P01562 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
IFNA1P01562 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IFNA1P01562 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.09■□□□□ 0.97
IFNA1P01562 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
IFNA1P01562 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IFNA1P01562 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
IFNA1P01562 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IFNA1P01562 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IFNA1P01562 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IFNA1P01562 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IFNA1P01562 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IFNA1P01562 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.05■□□□□ 0.96
IFNA1P01562 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IFNA1P01562 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.04■□□□□ 0.96
IFNA1P01562 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFNA1P01562 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
IFNA1P01562 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.03■□□□□ 0.96
IFNA1P01562 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IFNA1P01562 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFNA1P01562 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IFNA1P01562 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
IFNA1P01562 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
IFNA1P01562 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IFNA1P01562 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IFNA1P01562 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21■□□□□ 0.95
IFNA1P01562 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
IFNA1P01562 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IFNA1P01562 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
IFNA1P01562 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
IFNA1P01562 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IFNA1P01562 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.98■□□□□ 0.95
IFNA1P01562 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IFNA1P01562 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IFNA1P01562 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
IFNA1P01562 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
IFNA1P01562 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IFNA1P01562 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
IFNA1P01562 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IFNA1P01562 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IFNA1P01562 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IFNA1P01562 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IFNA1P01562 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IFNA1P01562 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IFNA1P01562 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IFNA1P01562 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
IFNA1P01562 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFNA1P01562 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFNA1P01562 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFNA1P01562 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.91■□□□□ 0.94
IFNA1P01562 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFNA1P01562 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
IFNA1P01562 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
IFNA1P01562 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IFNA1P01562 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
IFNA1P01562 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFNA1P01562 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.9■□□□□ 0.94
IFNA1P01562 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFNA1P01562 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
IFNA1P01562 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
IFNA1P01562 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFNA1P01562 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFNA1P01562 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IFNA1P01562 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.87■□□□□ 0.93
IFNA1P01562 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFNA1P01562 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFNA1P01562 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFNA1P01562 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.86■□□□□ 0.93
IFNA1P01562 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFNA1P01562 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
IFNA1P01562 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFNA1P01562 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFNA1P01562 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
IFNA1P01562 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
IFNA1P01562 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IFNA1P01562 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IFNA1P01562 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
IFNA1P01562 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IFNA1P01562 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
IFNA1P01562 AC135731.1-201ENST00000569415 2548 ntBASIC20.83■□□□□ 0.93
IFNA1P01562 AL121749.1-202ENST00000609313 2153 ntBASIC20.83■□□□□ 0.93
IFNA1P01562 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
IFNA1P01562 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
IFNA1P01562 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
IFNA1P01562 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms