Protein–RNA interactions for Protein: O60243

HS6ST1, Heparan-sulfate 6-O-sulfotransferase 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1O60243 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.3■■□□□ 1.64
HS6ST1O60243 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.29■■□□□ 1.64
HS6ST1O60243 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HS6ST1O60243 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HS6ST1O60243 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.29■■□□□ 1.64
HS6ST1O60243 AC139426.1-201ENST00000568218 2529 ntBASIC25.29■■□□□ 1.64
HS6ST1O60243 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HS6ST1O60243 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
HS6ST1O60243 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
HS6ST1O60243 AL133380.1-201ENST00000506013 324 ntBASIC25.27■■□□□ 1.64
HS6ST1O60243 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
HS6ST1O60243 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HS6ST1O60243 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HS6ST1O60243 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HS6ST1O60243 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HS6ST1O60243 CAHM-201ENST00000604200 896 ntBASIC25.25■■□□□ 1.63
HS6ST1O60243 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
HS6ST1O60243 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
HS6ST1O60243 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HS6ST1O60243 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
HS6ST1O60243 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
HS6ST1O60243 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HS6ST1O60243 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.23■■□□□ 1.63
HS6ST1O60243 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HS6ST1O60243 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.2■■□□□ 1.62
HS6ST1O60243 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
HS6ST1O60243 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
HS6ST1O60243 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
HS6ST1O60243 AL391121.1-201ENST00000607967 1349 ntBASIC25.17■■□□□ 1.62
HS6ST1O60243 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HS6ST1O60243 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
HS6ST1O60243 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
HS6ST1O60243 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HS6ST1O60243 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HS6ST1O60243 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.16■■□□□ 1.62
HS6ST1O60243 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HS6ST1O60243 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
HS6ST1O60243 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HS6ST1O60243 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
HS6ST1O60243 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
HS6ST1O60243 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.14■■□□□ 1.62
HS6ST1O60243 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
HS6ST1O60243 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HS6ST1O60243 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
HS6ST1O60243 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
HS6ST1O60243 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HS6ST1O60243 RPS2P35-201ENST00000443417 897 ntBASIC25.1■■□□□ 1.61
HS6ST1O60243 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HS6ST1O60243 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HS6ST1O60243 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
HS6ST1O60243 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
HS6ST1O60243 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.08■■□□□ 1.61
HS6ST1O60243 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.08■■□□□ 1.6
HS6ST1O60243 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
HS6ST1O60243 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
HS6ST1O60243 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
HS6ST1O60243 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
HS6ST1O60243 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
HS6ST1O60243 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
HS6ST1O60243 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HS6ST1O60243 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
HS6ST1O60243 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HS6ST1O60243 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.03■■□□□ 1.6
HS6ST1O60243 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HS6ST1O60243 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
HS6ST1O60243 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.02■■□□□ 1.6
HS6ST1O60243 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
HS6ST1O60243 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
HS6ST1O60243 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
HS6ST1O60243 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HS6ST1O60243 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HS6ST1O60243 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25■■□□□ 1.59
HS6ST1O60243 AL161658.1-201ENST00000623641 1967 ntBASIC25■■□□□ 1.59
HS6ST1O60243 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
HS6ST1O60243 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
HS6ST1O60243 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.99■■□□□ 1.59
HS6ST1O60243 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.99■■□□□ 1.59
HS6ST1O60243 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
HS6ST1O60243 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
HS6ST1O60243 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HS6ST1O60243 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
HS6ST1O60243 AL162393.1-201ENST00000437852 946 ntBASIC24.95■■□□□ 1.58
HS6ST1O60243 WASH5P-204ENST00000632292 975 ntBASIC24.95■■□□□ 1.58
HS6ST1O60243 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.94■■□□□ 1.58
HS6ST1O60243 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HS6ST1O60243 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.93■■□□□ 1.58
HS6ST1O60243 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HS6ST1O60243 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.93■■□□□ 1.58
HS6ST1O60243 AP006261.1-201ENST00000584783 668 ntBASIC24.93■■□□□ 1.58
HS6ST1O60243 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.93■■□□□ 1.58
HS6ST1O60243 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.92■■□□□ 1.58
HS6ST1O60243 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.92■■□□□ 1.58
HS6ST1O60243 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HS6ST1O60243 ST7-AS1-201ENST00000456775 1889 ntBASIC24.92■■□□□ 1.58
HS6ST1O60243 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
HS6ST1O60243 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HS6ST1O60243 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HS6ST1O60243 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HS6ST1O60243 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
HS6ST1O60243 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms