Protein–RNA interactions for Protein: O15016

TRIM66, Tripartite motif-containing protein 66, humanhuman

Predictions only

Length 1,216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM66O15016 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TRIM66O15016 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
TRIM66O15016 MIR762-201ENST00000390236 83 ntBASIC28.6■■■□□ 2.17
TRIM66O15016 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.6■■■□□ 2.17
TRIM66O15016 AC120057.4-201ENST00000624722 1615 ntBASIC28.59■■■□□ 2.17
TRIM66O15016 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.59■■■□□ 2.17
TRIM66O15016 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.58■■■□□ 2.17
TRIM66O15016 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TRIM66O15016 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.58■■■□□ 2.17
TRIM66O15016 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.58■■■□□ 2.17
TRIM66O15016 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TRIM66O15016 MIR3665-201ENST00000578708 105 ntBASIC28.57■■■□□ 2.16
TRIM66O15016 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
TRIM66O15016 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TRIM66O15016 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.55■■■□□ 2.16
TRIM66O15016 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.55■■■□□ 2.16
TRIM66O15016 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.54■■■□□ 2.16
TRIM66O15016 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.54■■■□□ 2.16
TRIM66O15016 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TRIM66O15016 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.52■■■□□ 2.16
TRIM66O15016 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM66O15016 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM66O15016 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TRIM66O15016 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.52■■■□□ 2.16
TRIM66O15016 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM66O15016 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TRIM66O15016 AC005559.1-201ENST00000589661 871 ntBASIC28.51■■■□□ 2.15
TRIM66O15016 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
TRIM66O15016 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TRIM66O15016 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.47■■■□□ 2.15
TRIM66O15016 DUX4L28-201ENST00000623687 678 ntBASIC28.47■■■□□ 2.15
TRIM66O15016 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
TRIM66O15016 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
TRIM66O15016 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
TRIM66O15016 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TRIM66O15016 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TRIM66O15016 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
TRIM66O15016 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TRIM66O15016 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TRIM66O15016 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
TRIM66O15016 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
TRIM66O15016 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TRIM66O15016 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TRIM66O15016 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TRIM66O15016 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TRIM66O15016 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
TRIM66O15016 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TRIM66O15016 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.39■■■□□ 2.14
TRIM66O15016 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.39■■■□□ 2.13
TRIM66O15016 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
TRIM66O15016 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM66O15016 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TRIM66O15016 AC087741.3-201ENST00000624270 1347 ntBASIC28.38■■■□□ 2.13
TRIM66O15016 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
TRIM66O15016 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRIM66O15016 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.37■■■□□ 2.13
TRIM66O15016 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
TRIM66O15016 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
TRIM66O15016 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
TRIM66O15016 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TRIM66O15016 ABCB10P3-201ENST00000561950 2166 ntBASIC28.35■■■□□ 2.13
TRIM66O15016 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
TRIM66O15016 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM66O15016 ABCB10P1-201ENST00000614297 2181 ntBASIC28.34■■■□□ 2.13
TRIM66O15016 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.34■■■□□ 2.13
TRIM66O15016 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM66O15016 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRIM66O15016 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.33■■■□□ 2.13
TRIM66O15016 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM66O15016 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.33■■■□□ 2.13
TRIM66O15016 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TRIM66O15016 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.32■■■□□ 2.12
TRIM66O15016 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
TRIM66O15016 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
TRIM66O15016 AC044849.2-201ENST00000606596 710 ntBASIC28.31■■■□□ 2.12
TRIM66O15016 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TRIM66O15016 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.3■■■□□ 2.12
TRIM66O15016 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TRIM66O15016 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRIM66O15016 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRIM66O15016 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TRIM66O15016 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TRIM66O15016 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRIM66O15016 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRIM66O15016 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TRIM66O15016 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRIM66O15016 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRIM66O15016 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.24■■■□□ 2.11
TRIM66O15016 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM66O15016 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TRIM66O15016 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
TRIM66O15016 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TRIM66O15016 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM66O15016 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM66O15016 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
TRIM66O15016 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TRIM66O15016 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
TRIM66O15016 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TRIM66O15016 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.2■■■□□ 2.1
TRIM66O15016 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.2■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms