Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRAV6A0A075B6T7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRAV6A0A075B6T7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRAV6A0A075B6T7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
TRAV6A0A075B6T7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRAV6A0A075B6T7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRAV6A0A075B6T7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TRAV6A0A075B6T7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRAV6A0A075B6T7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
TRAV6A0A075B6T7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
TRAV6A0A075B6T7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.87■■□□□ 1.25
TRAV6A0A075B6T7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRAV6A0A075B6T7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRAV6A0A075B6T7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRAV6A0A075B6T7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRAV6A0A075B6T7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRAV6A0A075B6T7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRAV6A0A075B6T7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRAV6A0A075B6T7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV6A0A075B6T7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV6A0A075B6T7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV6A0A075B6T7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRAV6A0A075B6T7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
TRAV6A0A075B6T7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRAV6A0A075B6T7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
TRAV6A0A075B6T7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRAV6A0A075B6T7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.81■■□□□ 1.24
TRAV6A0A075B6T7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
TRAV6A0A075B6T7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRAV6A0A075B6T7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRAV6A0A075B6T7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TRAV6A0A075B6T7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
TRAV6A0A075B6T7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
TRAV6A0A075B6T7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
TRAV6A0A075B6T7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRAV6A0A075B6T7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV6A0A075B6T7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRAV6A0A075B6T7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
TRAV6A0A075B6T7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRAV6A0A075B6T7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRAV6A0A075B6T7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV6A0A075B6T7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
TRAV6A0A075B6T7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV6A0A075B6T7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRAV6A0A075B6T7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
TRAV6A0A075B6T7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRAV6A0A075B6T7 AL121749.1-202ENST00000609313 2153 ntBASIC22.74■■□□□ 1.23
TRAV6A0A075B6T7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.74■■□□□ 1.23
TRAV6A0A075B6T7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRAV6A0A075B6T7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRAV6A0A075B6T7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.73■■□□□ 1.23
TRAV6A0A075B6T7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
TRAV6A0A075B6T7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV6A0A075B6T7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV6A0A075B6T7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
TRAV6A0A075B6T7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRAV6A0A075B6T7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRAV6A0A075B6T7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRAV6A0A075B6T7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.7■■□□□ 1.22
TRAV6A0A075B6T7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC22.7■■□□□ 1.22
TRAV6A0A075B6T7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRAV6A0A075B6T7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRAV6A0A075B6T7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRAV6A0A075B6T7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRAV6A0A075B6T7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRAV6A0A075B6T7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRAV6A0A075B6T7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRAV6A0A075B6T7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRAV6A0A075B6T7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRAV6A0A075B6T7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRAV6A0A075B6T7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.66■■□□□ 1.22
TRAV6A0A075B6T7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.65■■□□□ 1.22
TRAV6A0A075B6T7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
TRAV6A0A075B6T7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TRAV6A0A075B6T7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TRAV6A0A075B6T7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRAV6A0A075B6T7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRAV6A0A075B6T7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
TRAV6A0A075B6T7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV6A0A075B6T7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV6A0A075B6T7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TRAV6A0A075B6T7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.6■■□□□ 1.21
TRAV6A0A075B6T7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRAV6A0A075B6T7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRAV6A0A075B6T7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRAV6A0A075B6T7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.21
TRAV6A0A075B6T7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRAV6A0A075B6T7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.57■■□□□ 1.2
TRAV6A0A075B6T7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
TRAV6A0A075B6T7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
TRAV6A0A075B6T7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
TRAV6A0A075B6T7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAV6A0A075B6T7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC22.54■■□□□ 1.2
TRAV6A0A075B6T7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAV6A0A075B6T7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAV6A0A075B6T7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.53■■□□□ 1.2
TRAV6A0A075B6T7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV6A0A075B6T7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRAV6A0A075B6T7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAV6A0A075B6T7 DRD5P2-201ENST00000421395 2012 ntBASIC22.52■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms