Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRP9P49458 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SRP9P49458 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRP9P49458 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.56■□□□□ 0.56
SRP9P49458 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRP9P49458 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.56■□□□□ 0.56
SRP9P49458 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SRP9P49458 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.56■□□□□ 0.56
SRP9P49458 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SRP9P49458 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRP9P49458 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SRP9P49458 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SRP9P49458 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.56■□□□□ 0.56
SRP9P49458 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRP9P49458 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.55■□□□□ 0.56
SRP9P49458 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.55■□□□□ 0.56
SRP9P49458 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRP9P49458 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRP9P49458 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRP9P49458 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRP9P49458 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRP9P49458 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.55■□□□□ 0.56
SRP9P49458 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRP9P49458 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRP9P49458 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SRP9P49458 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SRP9P49458 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRP9P49458 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRP9P49458 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRP9P49458 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRP9P49458 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SRP9P49458 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.55■□□□□ 0.56
SRP9P49458 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRP9P49458 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SRP9P49458 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRP9P49458 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRP9P49458 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRP9P49458 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.54■□□□□ 0.56
SRP9P49458 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRP9P49458 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRP9P49458 AC010141.3-201ENST00000456659 717 ntBASIC18.54■□□□□ 0.56
SRP9P49458 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRP9P49458 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.54■□□□□ 0.56
SRP9P49458 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.54■□□□□ 0.56
SRP9P49458 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SRP9P49458 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRP9P49458 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRP9P49458 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRP9P49458 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRP9P49458 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRP9P49458 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SRP9P49458 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.53■□□□□ 0.56
SRP9P49458 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRP9P49458 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SRP9P49458 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.53■□□□□ 0.56
SRP9P49458 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRP9P49458 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.53■□□□□ 0.56
SRP9P49458 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRP9P49458 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.53■□□□□ 0.56
SRP9P49458 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRP9P49458 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.53■□□□□ 0.56
SRP9P49458 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.53■□□□□ 0.56
SRP9P49458 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.53■□□□□ 0.56
SRP9P49458 IGHV3-19-201ENST00000521488 291 ntBASIC18.53■□□□□ 0.56
SRP9P49458 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.53■□□□□ 0.56
SRP9P49458 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRP9P49458 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRP9P49458 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.53■□□□□ 0.56
SRP9P49458 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.53■□□□□ 0.56
SRP9P49458 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRP9P49458 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SRP9P49458 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.53■□□□□ 0.56
SRP9P49458 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRP9P49458 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRP9P49458 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRP9P49458 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SRP9P49458 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRP9P49458 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRP9P49458 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SRP9P49458 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRP9P49458 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SRP9P49458 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SRP9P49458 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
SRP9P49458 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.52■□□□□ 0.56
SRP9P49458 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRP9P49458 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SRP9P49458 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.52■□□□□ 0.56
SRP9P49458 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRP9P49458 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.52■□□□□ 0.56
SRP9P49458 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRP9P49458 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRP9P49458 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRP9P49458 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SRP9P49458 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SRP9P49458 FEM1AP1-201ENST00000431297 1995 ntBASIC18.51■□□□□ 0.55
SRP9P49458 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.51■□□□□ 0.55
SRP9P49458 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP9P49458 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP9P49458 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRP9P49458 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms