Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC093787.1-201ENST00000450396 207 ntBASIC21.8■■□□□ 1.08
HPS4Q9NQG7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.8■■□□□ 1.08
HPS4Q9NQG7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.8■■□□□ 1.08
HPS4Q9NQG7 AC008175.2-201ENST00000612840 297 ntBASIC21.8■■□□□ 1.08
HPS4Q9NQG7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.8■■□□□ 1.08
HPS4Q9NQG7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HPS4Q9NQG7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HPS4Q9NQG7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HPS4Q9NQG7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.8■■□□□ 1.08
HPS4Q9NQG7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HPS4Q9NQG7 MKRN4P-201ENST00000444706 1521 ntBASIC21.8■■□□□ 1.08
HPS4Q9NQG7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HPS4Q9NQG7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HPS4Q9NQG7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HPS4Q9NQG7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 MIR4758-201ENST00000577688 71 ntBASIC21.79■■□□□ 1.08
HPS4Q9NQG7 AC016405.3-201ENST00000607710 860 ntBASIC21.79■■□□□ 1.08
HPS4Q9NQG7 OR10C1-204ENST00000622521 1039 ntBASIC21.79■■□□□ 1.08
HPS4Q9NQG7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
HPS4Q9NQG7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPS4Q9NQG7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPS4Q9NQG7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPS4Q9NQG7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HPS4Q9NQG7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
HPS4Q9NQG7 POU5F1P4-201ENST00000413175 1085 ntBASIC21.77■■□□□ 1.08
HPS4Q9NQG7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPS4Q9NQG7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
HPS4Q9NQG7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.77■■□□□ 1.08
HPS4Q9NQG7 AC120498.10-201ENST00000621827 505 ntBASIC21.77■■□□□ 1.08
HPS4Q9NQG7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPS4Q9NQG7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
HPS4Q9NQG7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
HPS4Q9NQG7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
HPS4Q9NQG7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.76■■□□□ 1.07
HPS4Q9NQG7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HPS4Q9NQG7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 AL512625.2-201ENST00000417533 625 ntBASIC21.75■■□□□ 1.07
HPS4Q9NQG7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 AC066615.1-201ENST00000640911 628 ntBASIC21.75■■□□□ 1.07
HPS4Q9NQG7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.75■■□□□ 1.07
HPS4Q9NQG7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms