Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.29■■□□□ 1.16
TRIM11Q96F44 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM11Q96F44 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM11Q96F44 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM11Q96F44 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
TRIM11Q96F44 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM11Q96F44 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.29■■□□□ 1.16
TRIM11Q96F44 AL354811.1-201ENST00000610286 706 ntBASIC22.29■■□□□ 1.16
TRIM11Q96F44 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
TRIM11Q96F44 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM11Q96F44 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.29■■□□□ 1.16
TRIM11Q96F44 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.29■■□□□ 1.16
TRIM11Q96F44 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM11Q96F44 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM11Q96F44 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM11Q96F44 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
TRIM11Q96F44 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM11Q96F44 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM11Q96F44 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.28■■□□□ 1.16
TRIM11Q96F44 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.28■■□□□ 1.16
TRIM11Q96F44 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM11Q96F44 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM11Q96F44 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
TRIM11Q96F44 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.28■■□□□ 1.16
TRIM11Q96F44 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.27■■□□□ 1.16
TRIM11Q96F44 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM11Q96F44 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM11Q96F44 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.27■■□□□ 1.16
TRIM11Q96F44 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.27■■□□□ 1.16
TRIM11Q96F44 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM11Q96F44 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
TRIM11Q96F44 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.27■■□□□ 1.16
TRIM11Q96F44 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.27■■□□□ 1.16
TRIM11Q96F44 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM11Q96F44 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.27■■□□□ 1.16
TRIM11Q96F44 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM11Q96F44 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.27■■□□□ 1.15
TRIM11Q96F44 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
TRIM11Q96F44 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.26■■□□□ 1.15
TRIM11Q96F44 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.26■■□□□ 1.15
TRIM11Q96F44 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.26■■□□□ 1.15
TRIM11Q96F44 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.26■■□□□ 1.15
TRIM11Q96F44 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.26■■□□□ 1.15
TRIM11Q96F44 AC142381.2-201ENST00000566120 298 ntBASIC22.26■■□□□ 1.15
TRIM11Q96F44 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.26■■□□□ 1.15
TRIM11Q96F44 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.26■■□□□ 1.15
TRIM11Q96F44 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.26■■□□□ 1.15
TRIM11Q96F44 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.26■■□□□ 1.15
TRIM11Q96F44 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM11Q96F44 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM11Q96F44 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.26■■□□□ 1.15
TRIM11Q96F44 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM11Q96F44 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM11Q96F44 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.25■■□□□ 1.15
TRIM11Q96F44 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM11Q96F44 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.25■■□□□ 1.15
TRIM11Q96F44 AL358852.1-201ENST00000623174 1268 ntBASIC22.25■■□□□ 1.15
TRIM11Q96F44 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.25■■□□□ 1.15
TRIM11Q96F44 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM11Q96F44 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM11Q96F44 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.25■■□□□ 1.15
TRIM11Q96F44 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM11Q96F44 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM11Q96F44 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM11Q96F44 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.25■■□□□ 1.15
TRIM11Q96F44 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
TRIM11Q96F44 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM11Q96F44 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.24■■□□□ 1.15
TRIM11Q96F44 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
TRIM11Q96F44 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM11Q96F44 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRIM11Q96F44 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM11Q96F44 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.23■■□□□ 1.15
TRIM11Q96F44 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM11Q96F44 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM11Q96F44 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.23■■□□□ 1.15
TRIM11Q96F44 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM11Q96F44 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM11Q96F44 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM11Q96F44 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.23■■□□□ 1.15
TRIM11Q96F44 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM11Q96F44 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.23■■□□□ 1.15
TRIM11Q96F44 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.23■■□□□ 1.15
TRIM11Q96F44 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.23■■□□□ 1.15
TRIM11Q96F44 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.23■■□□□ 1.15
TRIM11Q96F44 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM11Q96F44 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TRIM11Q96F44 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM11Q96F44 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRIM11Q96F44 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
TRIM11Q96F44 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM11Q96F44 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM11Q96F44 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.22■■□□□ 1.15
TRIM11Q96F44 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM11Q96F44 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM11Q96F44 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM11Q96F44 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM11Q96F44 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM11Q96F44 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRIM11Q96F44 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms