Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 GABARAPL3-202ENST00000624044 1851 ntBASIC14.27□□□□□ -0.13
COPS9Q8WXC6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COPS9Q8WXC6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COPS9Q8WXC6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 AC087393.1-201ENST00000582896 145 ntBASIC14.25□□□□□ -0.13
COPS9Q8WXC6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COPS9Q8WXC6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COPS9Q8WXC6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms