Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 AL136162.1-201ENST00000607711 1078 ntBASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN22Q8N7P3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 AP006587.3-201ENST00000525742 1516 ntBASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN22Q8N7P3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 AC096631.2-201ENST00000436136 790 ntBASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN22Q8N7P3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN22Q8N7P3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CLDN22Q8N7P3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 AC135279.3-201ENST00000610945 1311 ntBASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CLDN22Q8N7P3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN22Q8N7P3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN22Q8N7P3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms