Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 AFG3L1P-217ENST00000557444 2447 ntBASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 AL049796.1-201ENST00000565336 1766 ntBASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
IGKV2-28A0A075B6P5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 C17orf82-201ENST00000623772 1530 ntBASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 AP005212.1-201ENST00000581547 1997 ntBASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
IGKV2-28A0A075B6P5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC13.9□□□□□ -0.19
IGKV2-28A0A075B6P5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
IGKV2-28A0A075B6P5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 AC092028.1-203ENST00000608262 953 ntBASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.89□□□□□ -0.19
IGKV2-28A0A075B6P5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 TSPY9P-201ENST00000440215 945 ntBASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 TSPY11P-201ENST00000442607 1045 ntBASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 PCDHAC2-203ENST00000615316 3011 ntBASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGKV2-28A0A075B6P5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGKV2-28A0A075B6P5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
IGKV2-28A0A075B6P5 AC073314.1-201ENST00000568729 2216 ntBASIC13.87□□□□□ -0.19
IGKV2-28A0A075B6P5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms