Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 NMT1-202ENST00000543908 1066 ntTSL 211.92□□□□□ -0.56e-11■□□□□ 8.7
DDX3XO00571 NVL-208ENST00000467882 1310 ntTSL 510.93□□□□□ -0.666e-6■□□□□ 8.7
DDX3XO00571 NMT1-201ENST00000258960 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.696e-11■□□□□ 8.7
DDX3XO00571 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.726e-6■□□□□ 8.7
DDX3XO00571 NVL-209ENST00000468088 248 ntTSL 510.37□□□□□ -0.756e-6■□□□□ 8.7
DDX3XO00571 NVL-218ENST00000487758 640 ntTSL 410.33□□□□□ -0.766e-6■□□□□ 8.7
DDX3XO00571 NVL-210ENST00000468673 921 ntTSL 210□□□□□ -0.816e-6■□□□□ 8.7
DDX3XO00571 NVL-203ENST00000391875 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.846e-6■□□□□ 8.7
DDX3XO00571 NVL-216ENST00000482491 3003 ntTSL 5 BASIC9.58□□□□□ -0.886e-6■□□□□ 8.7
DDX3XO00571 NVL-202ENST00000340871 2431 ntTSL 2 BASIC9.03□□□□□ -0.966e-6■□□□□ 8.7
DDX3XO00571 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -16e-6■□□□□ 8.7
DDX3XO00571 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.21□□□□□ -1.257e-16■□□□□ 8.7
DDX3XO00571 NUP107-208ENST00000538549 678 ntTSL 55.89□□□□□ -1.477e-16■□□□□ 8.7
DDX3XO00571 NVL-213ENST00000470903 548 ntTSL 35.67□□□□□ -1.56e-6■□□□□ 8.7
DDX3XO00571 NVL-206ENST00000461546 577 ntTSL 45.49□□□□□ -1.536e-6■□□□□ 8.7
DDX3XO00571 NVL-205ENST00000461466 693 ntTSL 55.02□□□□□ -1.616e-6■□□□□ 8.7
DDX3XO00571 NVL-221ENST00000492281 553 ntTSL 43.95□□□□□ -1.786e-6■□□□□ 8.7
DDX3XO00571 NVL-214ENST00000470989 567 ntTSL 43.84□□□□□ -1.796e-6■□□□□ 8.7
DDX3XO00571 NVL-204ENST00000436927 766 ntTSL 33.82□□□□□ -1.86e-6■□□□□ 8.7
DDX3XO00571 SEL1L3-207ENST00000510880 553 ntTSL 43.71□□□□□ -1.826e-11■□□□□ 8.7
DDX3XO00571 NVL-219ENST00000488718 564 ntTSL 43.34□□□□□ -1.876e-6■□□□□ 8.7
DDX3XO00571 AMN-202ENST00000541086 2269 ntTSL 224.81■■□□□ 1.565e-9■□□□□ 8.7
DDX3XO00571 EGLN2-203ENST00000593397 572 ntTSL 223.46■■□□□ 1.355e-9■□□□□ 8.7
DDX3XO00571 BTBD2-206ENST00000589200 858 ntTSL 521.89■■□□□ 1.095e-9■□□□□ 8.7
DDX3XO00571 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.745e-9■□□□□ 8.7
DDX3XO00571 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.525e-9■□□□□ 8.7
DDX3XO00571 PHRF1-206ENST00000534320 5178 ntTSL 517.99■□□□□ 0.475e-9■□□□□ 8.7
DDX3XO00571 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.435e-9■□□□□ 8.7
DDX3XO00571 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.45e-9■□□□□ 8.7
DDX3XO00571 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.145e-9■□□□□ 8.7
DDX3XO00571 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.065e-9■□□□□ 8.7
DDX3XO00571 EGLN2-213ENST00000596517 574 ntTSL 414.84□□□□□ -0.035e-9■□□□□ 8.7
DDX3XO00571 RAB4B-EGLN2-202ENST00000596216 624 ntTSL 313.36□□□□□ -0.275e-9■□□□□ 8.7
DDX3XO00571 BTBD2-204ENST00000587825 961 ntTSL 513.32□□□□□ -0.285e-9■□□□□ 8.7
DDX3XO00571 USP33-211ENST00000524536 949 ntTSL 312.01□□□□□ -0.495e-9■□□□□ 8.7
DDX3XO00571 VAPB-201ENST00000265619 3596 ntTSL 29.37□□□□□ -0.915e-9■□□□□ 8.7
DDX3XO00571 VAPB-206ENST00000520497 937 ntTSL 29.1□□□□□ -0.955e-9■□□□□ 8.7
DDX3XO00571 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.21□□□□□ -1.585e-9■□□□□ 8.7
DDX3XO00571 ZNF800-202ENST00000393312 2375 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.366e-7■□□□□ 8.7
DDX3XO00571 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.07■□□□□ 02e-7■□□□□ 8.7
DDX3XO00571 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.59□□□□□ -0.072e-7■□□□□ 8.7
DDX3XO00571 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.072e-7■□□□□ 8.7
DDX3XO00571 GFI1B-201ENST00000339463 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.472e-7■□□□□ 8.7
DDX3XO00571 DDX5-205ENST00000577922 996 ntTSL 519.86■□□□□ 0.774e-42■□□□□ 8.7
DDX3XO00571 DDX5-228ENST00000584279 676 ntTSL 319.86■□□□□ 0.774e-42■□□□□ 8.7
DDX3XO00571 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.414e-42■□□□□ 8.7
DDX3XO00571 DDX5-220ENST00000581806 576 ntTSL 416.88■□□□□ 0.294e-42■□□□□ 8.7
DDX3XO00571 DDX5-219ENST00000581697 580 ntTSL 516.14■□□□□ 0.174e-42■□□□□ 8.7
DDX3XO00571 DDX5-232ENST00000585111 1051 ntTSL 216.05■□□□□ 0.164e-42■□□□□ 8.7
DDX3XO00571 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.25■□□□□ 0.034e-42■□□□□ 8.7
DDX3XO00571 DDX5-207ENST00000578400 575 ntTSL 514.48□□□□□ -0.094e-42■□□□□ 8.7
DDX3XO00571 DDX5-218ENST00000581693 2156 ntTSL 512.6□□□□□ -0.394e-42■□□□□ 8.7
DDX3XO00571 DDX5-203ENST00000540698 2225 ntTSL 512.39□□□□□ -0.434e-42■□□□□ 8.7
DDX3XO00571 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC11.72□□□□□ -0.534e-42■□□□□ 8.7
DDX3XO00571 DDX5-233ENST00000585223 699 ntTSL 211.69□□□□□ -0.544e-42■□□□□ 8.7
DDX3XO00571 DDX5-231ENST00000585060 572 ntTSL 49.72□□□□□ -0.854e-42■□□□□ 8.7
DDX3XO00571 DDX5-215ENST00000581230 3558 ntTSL 28.79□□□□□ -14e-42■□□□□ 8.7
DDX3XO00571 ITGA2-203ENST00000509814 3487 ntTSL 1 (best)10.91□□□□□ -0.668e-8■□□□□ 8.7
DDX3XO00571 ITGA2-206ENST00000513685 3501 ntTSL 1 (best)10.49□□□□□ -0.738e-8■□□□□ 8.7
DDX3XO00571 ITGA2-204ENST00000509960 3674 ntTSL 1 (best)10.41□□□□□ -0.748e-8■□□□□ 8.7
DDX3XO00571 ITGA2-205ENST00000510722 3530 ntTSL 1 (best)10.31□□□□□ -0.768e-8■□□□□ 8.7
DDX3XO00571 MNAT1-206ENST00000555545 612 ntTSL 313.56□□□□□ -0.242e-9■□□□□ 8.7
DDX3XO00571 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.612e-9■□□□□ 8.7
DDX3XO00571 MRPL24-203ENST00000412846 514 ntTSL 315.68■□□□□ 0.12e-9■□□□□ 8.7
DDX3XO00571 ZHX1-207ENST00000524267 614 ntTSL 415.61■□□□□ 0.092e-9■□□□□ 8.7
DDX3XO00571 MRPL24-201ENST00000361531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.252e-9■□□□□ 8.7
DDX3XO00571 MRPL24-205ENST00000434558 990 ntTSL 511.36□□□□□ -0.592e-9■□□□□ 8.7
DDX3XO00571 DNAJA3-208ENST00000573120 403 ntTSL 1 (best)6.72□□□□□ -1.332e-9■□□□□ 8.7
DDX3XO00571 ZHX1-204ENST00000517516 780 ntTSL 35.95□□□□□ -1.462e-9■□□□□ 8.7
DDX3XO00571 ELOF1-209ENST00000593077 585 ntTSL 45.72□□□□□ -1.492e-9■□□□□ 8.7
DDX3XO00571 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.89□□□□□ -2.112e-12■□□□□ 8.7
DDX3XO00571 MRPL4-208ENST00000590702 876 ntTSL 514.2□□□□□ -0.145e-7■□□□□ 8.7
DDX3XO00571 AQR-202ENST00000543879 5722 ntTSL 28.06□□□□□ -1.128e-8■□□□□ 8.7
DDX3XO00571 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.288e-8■□□□□ 8.7
DDX3XO00571 AGRN-205ENST00000469403 899 ntTSL 327.89■■■□□ 2.062e-6■□□□□ 8.7
DDX3XO00571 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.71■■□□□ 1.712e-6■□□□□ 8.7
DDX3XO00571 SH2B1-208ENST00000563591 588 ntTSL 223.51■■□□□ 1.352e-6■□□□□ 8.7
DDX3XO00571 SH2B1-209ENST00000563674 719 ntTSL 323.28■■□□□ 1.322e-6■□□□□ 8.7
DDX3XO00571 SH2B1-212ENST00000567536 484 ntTSL 323.23■■□□□ 1.312e-6■□□□□ 8.7
DDX3XO00571 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.622e-6■□□□□ 8.7
DDX3XO00571 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.77■□□□□ 0.592e-6■□□□□ 8.7
DDX3XO00571 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.1■□□□□ 0.492e-6■□□□□ 8.7
DDX3XO00571 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.76■□□□□ 0.432e-6■□□□□ 8.7
DDX3XO00571 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.51■□□□□ 0.392e-6■□□□□ 8.7
DDX3XO00571 RASA1-206ENST00000515800 4979 ntTSL 1 (best)17.04■□□□□ 0.322e-6■□□□□ 8.7
DDX3XO00571 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.292e-6■□□□□ 8.7
DDX3XO00571 SH2B1-211ENST00000566209 533 ntTSL 413.26□□□□□ -0.292e-6■□□□□ 8.7
DDX3XO00571 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.46■□□□□ 0.556e-49■□□□□ 8.7
DDX3XO00571 UBE2K-205ENST00000510719 566 ntTSL 39.36□□□□□ -0.914e-10■□□□□ 8.7
DDX3XO00571 WDR44-205ENST00000493448 1041 ntTSL 411.63□□□□□ -0.558e-12■□□□□ 8.6
DDX3XO00571 GNB1-202ENST00000434686 684 ntTSL 39.55□□□□□ -0.888e-12■□□□□ 8.6
DDX3XO00571 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC9.3□□□□□ -0.928e-12■□□□□ 8.6
DDX3XO00571 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.078e-12■□□□□ 8.6
DDX3XO00571 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.09□□□□□ -1.118e-12■□□□□ 8.6
DDX3XO00571 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.61e-27■□□□□ 8.6
DDX3XO00571 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.281e-27■□□□□ 8.6
DDX3XO00571 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.49■□□□□ 0.071e-6■□□□□ 8.6
DDX3XO00571 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.421e-23■□□□□ 8.6
DDX3XO00571 PIH1D1-222ENST00000601825 381 ntTSL 316.86■□□□□ 0.291e-23■□□□□ 8.6
DDX3XO00571 PIH1D1-206ENST00000595516 841 ntTSL 316.67■□□□□ 0.261e-23■□□□□ 8.6
Retrieved 100 of 47,714 protein–RNA pairs in 3749.7 ms