RNA–Protein interactions for RNA: ENST00000258960.6

NMT1-201, Transcript of N-myristoyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NMT1, Length 4,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMT1-201ENST00000258960 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
NMT1-201ENST00000258960 DCAF8L2P0C7V8 631 aa18.19■□□□□ 0.5
NMT1-201ENST00000258960 SHROOM4Q9ULL8 1493 aa17.29■□□□□ 0.36
NMT1-201ENST00000258960 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
NMT1-201ENST00000258960 CCDC180Q9P1Z9 1646 aa17.11■□□□□ 0.33
NMT1-201ENST00000258960 ABCC9O60706 1549 aa16.65■□□□□ 0.26
NMT1-201ENST00000258960 ZCCHC6Q5VYS8 1495 aaKnown RBP16.65■□□□□ 0.26
NMT1-201ENST00000258960 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
NMT1-201ENST00000258960 NACADO15069 1562 aa16.29■□□□□ 0.2
NMT1-201ENST00000258960 TRIM41Q8WV44 630 aa16.28■□□□□ 0.2
NMT1-201ENST00000258960 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.2
NMT1-201ENST00000258960 FAM9AQ8IZU1 332 aaPredicted RBP16.22■□□□□ 0.19
NMT1-201ENST00000258960 APLP2Q06481 763 aa16.17■□□□□ 0.18
NMT1-201ENST00000258960 SCRIBQ14160 1630 aa16.11■□□□□ 0.17
NMT1-201ENST00000258960 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
NMT1-201ENST00000258960 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
NMT1-201ENST00000258960 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
NMT1-201ENST00000258960 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
NMT1-201ENST00000258960 UBTFP17480 764 aaKnown RBP15.84■□□□□ 0.13
NMT1-201ENST00000258960 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
NMT1-201ENST00000258960 ZEB1P37275 1124 aaPredicted RBP15.67■□□□□ 0.1
NMT1-201ENST00000258960 RSF1Q96T23 1441 aaPredicted RBP15.62■□□□□ 0.09
NMT1-201ENST00000258960 PCGF6Q9BYE7 350 aa15.52■□□□□ 0.08
NMT1-201ENST00000258960 RANGAP1P46060 587 aaPredicted RBP15.5■□□□□ 0.07
NMT1-201ENST00000258960 BAZ1BQ9UIG0 1483 aaKnown RBP15.48■□□□□ 0.07
NMT1-201ENST00000258960 TRIM26Q12899 539 aaPredicted RBP15.48■□□□□ 0.07
NMT1-201ENST00000258960 ATP1B4Q9UN42 357 aaPredicted RBP15.47■□□□□ 0.07
NMT1-201ENST00000258960 SMARCA2P51531 1590 aa15.42■□□□□ 0.06
NMT1-201ENST00000258960 EEA1Q15075 1411 aa15.38■□□□□ 0.05
NMT1-201ENST00000258960 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
NMT1-201ENST00000258960 LOC105371045A0A1W2PR82 267 aa15.36■□□□□ 0.05
NMT1-201ENST00000258960 TTBK1Q5TCY1 1321 aaPredicted RBP15.34■□□□□ 0.05
NMT1-201ENST00000258960 CCER1Q8TC90 406 aaPredicted RBP15.33■□□□□ 0.05
NMT1-201ENST00000258960 CECR2Q9BXF3 1484 aa15.32■□□□□ 0.04
NMT1-201ENST00000258960 MROH2BQ7Z745 1585 aa15.26■□□□□ 0.03
NMT1-201ENST00000258960 TOP2AP11388 1531 aaKnown RBP15.25■□□□□ 0.03
NMT1-201ENST00000258960 WRNQ14191 1432 aaPredicted RBP eCLIP15.21■□□□□ 0.02
NMT1-201ENST00000258960 SMARCA4P51532 1647 aa15.2■□□□□ 0.02
NMT1-201ENST00000258960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
NMT1-201ENST00000258960 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
NMT1-201ENST00000258960 CCDC88BA6NC98 1476 aa15.1■□□□□ 0.01
NMT1-201ENST00000258960 GOLGA3Q08378 1498 aa15.08■□□□□ 0
NMT1-201ENST00000258960 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0
NMT1-201ENST00000258960 KIF27Q86VH2 1401 aa15.07■□□□□ 0
NMT1-201ENST00000258960 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
NMT1-201ENST00000258960 WIZO95785 1651 aa15.06■□□□□ 0
NMT1-201ENST00000258960 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
NMT1-201ENST00000258960 PPARGC1BQ86YN6 1023 aaKnown RBP15.02■□□□□ -0
NMT1-201ENST00000258960 CDK11AQ9UQ88 783 aaPredicted RBP15.01□□□□□ -0.01
NMT1-201ENST00000258960 HRCP23327 699 aa15□□□□□ -0.01
NMT1-201ENST00000258960 PDS5BQ9NTI5 1447 aa15□□□□□ -0.01
NMT1-201ENST00000258960 FBLN2P98095 1184 aa14.96□□□□□ -0.01
NMT1-201ENST00000258960 TNIKQ9UKE5 1360 aa14.95□□□□□ -0.02
NMT1-201ENST00000258960 NCAPD3P42695 1498 aa14.93□□□□□ -0.02
NMT1-201ENST00000258960 CENPBP07199 599 aaPredicted RBP14.92□□□□□ -0.02
NMT1-201ENST00000258960 CLIP1P30622 1438 aa14.92□□□□□ -0.02
NMT1-201ENST00000258960 CADPSQ9ULU8 1353 aa14.91□□□□□ -0.02
NMT1-201ENST00000258960 ITGAEP38570 1179 aa14.91□□□□□ -0.02
NMT1-201ENST00000258960 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
NMT1-201ENST00000258960 FAM50AQ14320 339 aaKnown RBP14.9□□□□□ -0.02
NMT1-201ENST00000258960 ABCC8Q09428 1581 aa14.89□□□□□ -0.03
NMT1-201ENST00000258960 MYT1LQ9UL68 1186 aa14.87□□□□□ -0.03
NMT1-201ENST00000258960 EIF4G1Q04637 1599 aaKnown RBP14.87□□□□□ -0.03
NMT1-201ENST00000258960 ACIN1Q9UKV3 1341 aaKnown RBP14.84□□□□□ -0.03
NMT1-201ENST00000258960 HMGXB3Q12766 1538 aa14.84□□□□□ -0.03
NMT1-201ENST00000258960 CEP162Q5TB80 1403 aa14.84□□□□□ -0.03
NMT1-201ENST00000258960 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
NMT1-201ENST00000258960 CUX2O14529 1486 aa14.79□□□□□ -0.04
NMT1-201ENST00000258960 P3H3Q8IVL6 736 aa14.77□□□□□ -0.04
NMT1-201ENST00000258960 CARMIL1Q5VZK9 1371 aa14.75□□□□□ -0.05
NMT1-201ENST00000258960 FHAD1B1AJZ9 1412 aa14.74□□□□□ -0.05
NMT1-201ENST00000258960 BICRAQ9NZM4 1560 aa14.74□□□□□ -0.05
NMT1-201ENST00000258960 SOGA1O94964 1423 aa14.71□□□□□ -0.05
NMT1-201ENST00000258960 TRIM52Q96A61 297 aa14.71□□□□□ -0.05
NMT1-201ENST00000258960 MTUS2Q5JR59 1369 aa14.7□□□□□ -0.06
NMT1-201ENST00000258960 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
NMT1-201ENST00000258960 NPM1P06748 294 aaKnown RBP eCLIP14.69□□□□□ -0.06
NMT1-201ENST00000258960 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
NMT1-201ENST00000258960 CFTRP13569 1480 aa14.61□□□□□ -0.07
NMT1-201ENST00000258960 RAPGEF2Q9Y4G8 1499 aa14.61□□□□□ -0.07
NMT1-201ENST00000258960 UNC13AQ9UPW8 1703 aa14.59□□□□□ -0.07
NMT1-201ENST00000258960 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
NMT1-201ENST00000258960 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.08
NMT1-201ENST00000258960 CARMIL2Q6F5E8 1435 aa14.56□□□□□ -0.08
NMT1-201ENST00000258960 FMN1Q68DA7 1419 aa14.55□□□□□ -0.08
NMT1-201ENST00000258960 PLEKHD1A6NEE1 506 aa14.54□□□□□ -0.08
NMT1-201ENST00000258960 NEFLP07196 543 aa14.54□□□□□ -0.08
NMT1-201ENST00000258960 ZNF777Q9ULD5 760 aaPredicted RBP14.52□□□□□ -0.08
NMT1-201ENST00000258960 TSPY4P0CV99 314 aa14.5□□□□□ -0.09
NMT1-201ENST00000258960 TSPY10P0CW01 314 aa14.5□□□□□ -0.09
NMT1-201ENST00000258960 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
NMT1-201ENST00000258960 ARID3CA6NKF2 412 aa14.48□□□□□ -0.09
NMT1-201ENST00000258960 NEUROD1Q13562 356 aa14.47□□□□□ -0.09
NMT1-201ENST00000258960 TDRD9Q8NDG6 1382 aaKnown RBP14.46□□□□□ -0.09
NMT1-201ENST00000258960 LAMC3Q9Y6N6 1575 aa14.46□□□□□ -0.09
NMT1-201ENST00000258960 TOP2BQ02880 1626 aa14.45□□□□□ -0.1
NMT1-201ENST00000258960 DIEXFQ68CQ4 756 aaKnown RBP14.44□□□□□ -0.1
NMT1-201ENST00000258960 ERICH3Q5RHP9 1530 aa14.44□□□□□ -0.1
NMT1-201ENST00000258960 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
NMT1-201ENST00000258960 KIF21BO75037 1637 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms