RNA–Protein interactions for RNA: ENST00000482491.5

NVL-216, Transcript of nuclear VCP-like, humanhuman

TSL 5 BASIC

Gene NVL, Length 3,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-216ENST00000482491 NISCHQ9Y2I1 1504 aa20.7■□□□□ 0.9
NVL-216ENST00000482491 CCDC180Q9P1Z9 1646 aa18.12■□□□□ 0.49
NVL-216ENST00000482491 ABCC9O60706 1549 aa17.4■□□□□ 0.38
NVL-216ENST00000482491 ZCCHC6Q5VYS8 1495 aaKnown RBP17.32■□□□□ 0.36
NVL-216ENST00000482491 DCAF8L2P0C7V8 631 aa17.25■□□□□ 0.35
NVL-216ENST00000482491 DCAF1Q9Y4B6 1507 aa17.09■□□□□ 0.33
NVL-216ENST00000482491 MYO15BQ96JP2 1530 aa16.98■□□□□ 0.31
NVL-216ENST00000482491 NACADO15069 1562 aa16.96■□□□□ 0.31
NVL-216ENST00000482491 RB1CC1Q8TDY2 1594 aa16.87■□□□□ 0.29
NVL-216ENST00000482491 SHROOM4Q9ULL8 1493 aa16.77■□□□□ 0.27
NVL-216ENST00000482491 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
NVL-216ENST00000482491 UNC13AQ9UPW8 1703 aa16.49■□□□□ 0.23
NVL-216ENST00000482491 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
NVL-216ENST00000482491 BICRAQ9NZM4 1560 aa16.36■□□□□ 0.21
NVL-216ENST00000482491 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
NVL-216ENST00000482491 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
NVL-216ENST00000482491 BAZ1AQ9NRL2 1556 aaPredicted RBP16■□□□□ 0.15
NVL-216ENST00000482491 MROH2BQ7Z745 1585 aa15.99■□□□□ 0.15
NVL-216ENST00000482491 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
NVL-216ENST00000482491 SMARCA4P51532 1647 aa15.95■□□□□ 0.14
NVL-216ENST00000482491 EIF4G1Q04637 1599 aaKnown RBP15.89■□□□□ 0.13
NVL-216ENST00000482491 WIZO95785 1651 aa15.84■□□□□ 0.13
NVL-216ENST00000482491 ATAD2BQ9ULI0 1458 aa15.76■□□□□ 0.11
NVL-216ENST00000482491 PEG3Q9GZU2 1588 aa15.75■□□□□ 0.11
NVL-216ENST00000482491 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
NVL-216ENST00000482491 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
NVL-216ENST00000482491 NCAPD3P42695 1498 aa15.67■□□□□ 0.1
NVL-216ENST00000482491 BAZ1BQ9UIG0 1483 aaKnown RBP15.66■□□□□ 0.1
NVL-216ENST00000482491 TOP2AP11388 1531 aaKnown RBP15.66■□□□□ 0.1
NVL-216ENST00000482491 HMGXB3Q12766 1538 aa15.6■□□□□ 0.09
NVL-216ENST00000482491 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.09
NVL-216ENST00000482491 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.08
NVL-216ENST00000482491 PELP1Q8IZL8 1130 aaKnown RBP15.33■□□□□ 0.04
NVL-216ENST00000482491 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.03
NVL-216ENST00000482491 CFTRP13569 1480 aa15.25■□□□□ 0.03
NVL-216ENST00000482491 HRCP23327 699 aa15.22■□□□□ 0.03
NVL-216ENST00000482491 CHIC1Q5VXU3 224 aa15.21■□□□□ 0.03
NVL-216ENST00000482491 NESP48681 1621 aa15.2■□□□□ 0.02
NVL-216ENST00000482491 LAMC3Q9Y6N6 1575 aa15.16■□□□□ 0.02
NVL-216ENST00000482491 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
NVL-216ENST00000482491 PRDM2Q13029 1718 aa15.11■□□□□ 0.01
NVL-216ENST00000482491 TRIM41Q8WV44 630 aa15.09■□□□□ 0.01
NVL-216ENST00000482491 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0.01
NVL-216ENST00000482491 PDS5BQ9NTI5 1447 aa15.07■□□□□ 0
NVL-216ENST00000482491 WRNQ14191 1432 aaPredicted RBP eCLIP15.05■□□□□ -0
NVL-216ENST00000482491 CEP164Q9UPV0 1460 aa15.01□□□□□ -0.01
NVL-216ENST00000482491 KIF21AQ7Z4S6 1674 aa14.98□□□□□ -0.01
NVL-216ENST00000482491 SYNJ1O43426 1573 aa14.98□□□□□ -0.01
NVL-216ENST00000482491 CUX1P39880 1505 aa14.96□□□□□ -0.01
NVL-216ENST00000482491 ERCC6Q03468 1493 aa14.94□□□□□ -0.02
NVL-216ENST00000482491 TOP2BQ02880 1626 aa14.93□□□□□ -0.02
NVL-216ENST00000482491 BIVM-ERCC5R4GMW8 1640 aa14.91□□□□□ -0.02
NVL-216ENST00000482491 URB2Q14146 1524 aaKnown RBP14.9□□□□□ -0.02
NVL-216ENST00000482491 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
NVL-216ENST00000482491 DNMBPQ6XZF7 1577 aa14.89□□□□□ -0.03
NVL-216ENST00000482491 TOPBP1Q92547 1522 aa14.89□□□□□ -0.03
NVL-216ENST00000482491 MRC2Q9UBG0 1479 aa14.88□□□□□ -0.03
NVL-216ENST00000482491 PPARGC1BQ86YN6 1023 aaKnown RBP14.87□□□□□ -0.03
NVL-216ENST00000482491 MYT1Q01538 1121 aa14.87□□□□□ -0.03
NVL-216ENST00000482491 FGD5Q6ZNL6 1462 aa14.84□□□□□ -0.03
NVL-216ENST00000482491 FAM9AQ8IZU1 332 aaPredicted RBP14.82□□□□□ -0.04
NVL-216ENST00000482491 POLA1P09884 1462 aaPredicted RBP14.8□□□□□ -0.04
NVL-216ENST00000482491 SOGA1O94964 1423 aa14.8□□□□□ -0.04
NVL-216ENST00000482491 WDR62O43379 1518 aa14.79□□□□□ -0.04
NVL-216ENST00000482491 THOC2Q8NI27 1593 aaKnown RBP14.79□□□□□ -0.04
NVL-216ENST00000482491 RAD54L2Q9Y4B4 1467 aa14.76□□□□□ -0.05
NVL-216ENST00000482491 RUSC2Q8N2Y8 1516 aa14.75□□□□□ -0.05
NVL-216ENST00000482491 PCGF6Q9BYE7 350 aa14.75□□□□□ -0.05
NVL-216ENST00000482491 CUX2O14529 1486 aa14.71□□□□□ -0.05
NVL-216ENST00000482491 EEA1Q15075 1411 aa14.7□□□□□ -0.06
NVL-216ENST00000482491 KIF27Q86VH2 1401 aa14.7□□□□□ -0.06
NVL-216ENST00000482491 ABCA10Q8WWZ4 1543 aa14.69□□□□□ -0.06
NVL-216ENST00000482491 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
NVL-216ENST00000482491 TARBP1Q13395 1621 aaKnown RBP14.67□□□□□ -0.06
NVL-216ENST00000482491 IFT140Q96RY7 1462 aa14.66□□□□□ -0.06
NVL-216ENST00000482491 TDRD9Q8NDG6 1382 aaKnown RBP14.66□□□□□ -0.06
NVL-216ENST00000482491 LOC105371045A0A1W2PR82 267 aa14.65□□□□□ -0.06
NVL-216ENST00000482491 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
NVL-216ENST00000482491 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
NVL-216ENST00000482491 IGF1RP08069 1367 aa14.6□□□□□ -0.07
NVL-216ENST00000482491 ZNF608Q9ULD9 1512 aaPredicted RBP14.6□□□□□ -0.07
NVL-216ENST00000482491 AQRO60306 1485 aaKnown RBP eCLIP14.6□□□□□ -0.073e-7■■■■■ 28.9
NVL-216ENST00000482491 SCAF1Q9H7N4 1312 aaKnown RBP14.59□□□□□ -0.07
NVL-216ENST00000482491 GAPVD1Q14C86 1478 aa14.59□□□□□ -0.07
NVL-216ENST00000482491 ABCA5Q8WWZ7 1642 aa14.57□□□□□ -0.08
NVL-216ENST00000482491 PRXQ9BXM0 1461 aa14.53□□□□□ -0.08
NVL-216ENST00000482491 CARMIL1Q5VZK9 1371 aa14.52□□□□□ -0.08
NVL-216ENST00000482491 ERICH3Q5RHP9 1530 aa14.52□□□□□ -0.09
NVL-216ENST00000482491 EIF4G3O43432 1585 aaKnown RBP14.51□□□□□ -0.09
NVL-216ENST00000482491 GRIN2BQ13224 1484 aa14.51□□□□□ -0.09
NVL-216ENST00000482491 KIF21BO75037 1637 aa14.5□□□□□ -0.09
NVL-216ENST00000482491 RAPGEF2Q9Y4G8 1499 aa14.5□□□□□ -0.09
NVL-216ENST00000482491 UBTFP17480 764 aaKnown RBP14.5□□□□□ -0.09
NVL-216ENST00000482491 GOLGA3Q08378 1498 aa14.49□□□□□ -0.09
NVL-216ENST00000482491 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
NVL-216ENST00000482491 CUL7Q14999 1698 aa14.46□□□□□ -0.09
NVL-216ENST00000482491 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
NVL-216ENST00000482491 FHAD1B1AJZ9 1412 aa14.43□□□□□ -0.1
NVL-216ENST00000482491 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
NVL-216ENST00000482491 ADAMTS12P58397 1594 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms